Z. japonica Nagirizaki
Zjn_sc00013.1.g02140.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G10050.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 407 3 247 2e-89 145.5 43.7 49.4
Subject 592 64 301
Annot | Symbols: OMR1 | L-O-methylthreonine resistant 1 | chr3:3099164-3101741 REVERSE LENGTH=592
NR ref|XP_006650494.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 407 26 407 e-164 126.5 82.1 87
Subject 515 2 515
Annot PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Oryza brachyantha]
IRGSP Os03t0713000-00_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 407 1 297 e-101 147.9 53.6 58.5
Subject 602 58 359
Annot
Sbicolor Sobic.001G116100.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 407 1 326 e-131 148.6 67.3 71.3
Subject 605 62 459
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00013.1.g02140.1.am.mkhc length: 407 aa.
IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site
method AccNumber shortName E-value location
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00165 DEHYDRATASE_SER_THR NA 74-87
IPR001721 Threonine dehydratase, C-terminal regulatory domain
Molecular Function GO:0004794 L-threonine ammonia-lyase activity    
Biological Process GO:0009097 isoleucine biosynthetic process    
HMMPfam PF00585 Thr_dehydrat_C 1.5e-23 282-318
318-401
IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
HMMPfam PF00291 PALP 2.3e-53 52-224
superfamily SSF53686 Tryptophan 6.9e-80 18-319
no_ID  
Gene3D G3DSA:3.40.1020.10 no description 2.4e-44 317-401
Gene3D G3DSA:3.40.50.1100 no description 5.3e-16 83-167
168-224
HMMPanther PTHR10314 SER/THR 1.2e-180 35-407
HMMPanther PTHR10314:SF30 THREONINE 1.2e-180 35-407
Seg seg seg NA 19-33
210-220
238-251
superfamily SSF55021 ACT-like 8.1e-26 319-403
Pseudomolecule
Chromosome Start End Strand
136701163675141-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00013.1 maker exon 1167566 1167799 . + . ID=Zjn_sc00013.1.g02140.1.am.mkhc:exon:1
Zjn_sc00013.1 maker exon 1168743 1168922 . + . ID=Zjn_sc00013.1.g02140.1.am.mkhc:exon:2
Zjn_sc00013.1 maker exon 1169070 1169339 . + . ID=Zjn_sc00013.1.g02140.1.am.mkhc:exon:3
Zjn_sc00013.1 maker exon 1170192 1170440 . + . ID=Zjn_sc00013.1.g02140.1.am.mkhc:exon:4
Zjn_sc00013.1 maker exon 1171827 1171961 . + . ID=Zjn_sc00013.1.g02140.1.am.mkhc:exon:5
Zjn_sc00013.1 maker exon 1172146 1172591 . + . ID=Zjn_sc00013.1.g02140.1.am.mkhc:exon:6

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