Z. japonica Nagirizaki
Zjn_sc00013.1.g02090.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G70730.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 551 71 551 0.0 120.1 70.6 77.5
Subject 662 77 662
Annot | Symbols: PGM2 | Phosphoglucomutase/phosphomannomutase family protein | chr1:26669020-26673166 REVERSE LENGTH=662
NR ref|XP_002466576.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 551 9 551 0.0 117.8 89.1 92.4
Subject 649 8 649
Annot hypothetical protein SORBIDRAFT_01g010280 [Sorghum bicolor] gi|241920430|gb|EER93574.1| hypothetical protein SORBIDRAFT_01g010280 [Sorghum bicolor]
IRGSP Os03t0712700-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 551 72 551 0.0 105.6 79.3 83.1
Subject 582 1 582
Annot
Sbicolor Sobic.001G116500.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 551 9 551 0.0 117.8 89.1 92.4
Subject 649 8 649
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00013.1.g02090.1.sm.mkhc length: 551 aa.
IPR005841 Alpha-D-phosphohexomutase superfamily
method AccNumber shortName E-value location
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0016868 intramolecular transferase activity, phosphotransferases    
FPrintScan PR00509 PGMPMM 3.5e-16 225-244
261-274
296-311
IPR005843 Alpha-D-phosphohexomutase, C-terminal
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0016868 intramolecular transferase activity, phosphotransferases    
HMMPfam PF00408 PGM_PMM_IV 9.1e-11 461-514
IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0016868 intramolecular transferase activity, phosphotransferases    
HMMPfam PF02879 PGM_PMM_II 2.6e-13 203-312
IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0016868 intramolecular transferase activity, phosphotransferases    
HMMPfam PF02880 PGM_PMM_III 0.00014 363-408
IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0016868 intramolecular transferase activity, phosphotransferases    
Gene3D G3DSA:3.40.120.10 no description 3.2e-10 112-214
215-309
310-361
363-404
superfamily SSF53738 Phosphoglucomutase, 2.6e-17 201-318
304-415
72-232
no_ID  
Gene3D G3DSA:3.30.310.50 no description 1.1e-62 405-551
HMMPanther PTHR22573 PHOSPHOHEXOMUTASE 3.5e-212 117-549
HMMPanther PTHR22573:SF5 PHOSPHOGLUCOMUTASE 3.5e-212 117-549
Seg seg seg NA 5-55
193-203
superfamily SSF55957 Phosphoglucomutase, 2.7e-51 410-551
Pseudomolecule
Chromosome Start End Strand
137001343706109-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00013.1 maker exon 1136598 1136891 . + . ID=Zjn_sc00013.1.g02090.1.sm.mkhc:exon:1
Zjn_sc00013.1 maker exon 1138574 1138629 . + . ID=Zjn_sc00013.1.g02090.1.sm.mkhc:exon:2
Zjn_sc00013.1 maker exon 1138840 1138894 . + . ID=Zjn_sc00013.1.g02090.1.sm.mkhc:exon:3
Zjn_sc00013.1 maker exon 1139155 1139274 . + . ID=Zjn_sc00013.1.g02090.1.sm.mkhc:exon:4
Zjn_sc00013.1 maker exon 1139363 1139463 . + . ID=Zjn_sc00013.1.g02090.1.sm.mkhc:exon:5
Zjn_sc00013.1 maker exon 1139584 1139643 . + . ID=Zjn_sc00013.1.g02090.1.sm.mkhc:exon:6
Zjn_sc00013.1 maker exon 1139733 1139832 . + . ID=Zjn_sc00013.1.g02090.1.sm.mkhc:exon:7
Zjn_sc00013.1 maker exon 1139910 1140067 . + . ID=Zjn_sc00013.1.g02090.1.sm.mkhc:exon:8
Zjn_sc00013.1 maker exon 1140166 1140261 . + . ID=Zjn_sc00013.1.g02090.1.sm.mkhc:exon:9
Zjn_sc00013.1 maker exon 1140764 1140804 . + . ID=Zjn_sc00013.1.g02090.1.sm.mkhc:exon:10
Zjn_sc00013.1 maker exon 1141293 1141468 . + . ID=Zjn_sc00013.1.g02090.1.sm.mkhc:exon:11
Zjn_sc00013.1 maker exon 1141549 1141625 . + . ID=Zjn_sc00013.1.g02090.1.sm.mkhc:exon:12
Zjn_sc00013.1 maker exon 1141781 1141913 . + . ID=Zjn_sc00013.1.g02090.1.sm.mkhc:exon:13
Zjn_sc00013.1 maker exon 1142138 1142254 . + . ID=Zjn_sc00013.1.g02090.1.sm.mkhc:exon:14
Zjn_sc00013.1 maker exon 1142339 1142573 . + . ID=Zjn_sc00013.1.g02090.1.sm.mkhc:exon:15

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