Z. japonica Nagirizaki
Zjn_sc00013.1.g01390.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G18070.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 409 33 225 9e-61 103.7 27.6 33.3
Subject 424 22 212
Annot | Symbols: BGLU43 | beta glucosidase 43 | chr3:6187294-6189947 FORWARD LENGTH=424
NR ref|XP_010257808.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 409 99 357 9e-91 114.7 40.8 49.1
Subject 469 191 464
Annot PREDICTED: beta-glucosidase 44-like isoform X5 [Nelumbo nucifera]
IRGSP Os03t0703100-03_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 409 214 382 2e-70 85.1 33 36.4
Subject 348 143 320
Annot
Sbicolor Sobic.001G123100.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 409 227 396 3e-74 138.6 33.5 35.5
Subject 567 384 551
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00013.1.g01390.1.sm.mkhc length: 409 aa.
IPR001360 Glycoside hydrolase, family 1
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
FPrintScan PR00131 GLHYDRLASE1 7.3e-13 265-273
286-297
307-324
331-343
HMMPanther PTHR10353 GLYCOSYL 9.6e-149 37-361
HMMPfam PF00232 Glyco_hydro_1 5.2e-41 44-102
108-224
235-361
IPR013781 Glycoside hydrolase, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.20.20.80 no description 1.3e-52 39-102
107-225
226-358
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 4.1e-106 44-363
IPR018120 Glycoside hydrolase, family 1, active site
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
PatternScan PS00653 GLYCOSYL_HYDROL_F1_2 NA 50-64
no_ID  
Seg seg seg NA 14-29
369-386
Pseudomolecule
Chromosome Start End Strand
140672744071261+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00013.1 maker exon 771446 771499 . - . ID=Zjn_sc00013.1.g01390.1.sm.mkhc:exon:9
Zjn_sc00013.1 maker exon 771540 771904 . - . ID=Zjn_sc00013.1.g01390.1.sm.mkhc:exon:8
Zjn_sc00013.1 maker exon 772003 772105 . - . ID=Zjn_sc00013.1.g01390.1.sm.mkhc:exon:7
Zjn_sc00013.1 maker exon 772220 772251 . - . ID=Zjn_sc00013.1.g01390.1.sm.mkhc:exon:6
Zjn_sc00013.1 maker exon 772974 773085 . - . ID=Zjn_sc00013.1.g01390.1.sm.mkhc:exon:5
Zjn_sc00013.1 maker exon 773771 774014 . - . ID=Zjn_sc00013.1.g01390.1.sm.mkhc:exon:4
Zjn_sc00013.1 maker exon 774613 774626 . - . ID=Zjn_sc00013.1.g01390.1.sm.mkhc:exon:3
Zjn_sc00013.1 maker exon 774896 774954 . - . ID=Zjn_sc00013.1.g01390.1.sm.mkhc:exon:2
Zjn_sc00013.1 maker exon 775187 775433 . - . ID=Zjn_sc00013.1.g01390.1.sm.mkhc:exon:1

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