Z. japonica Nagirizaki
Zjn_sc00012.1.g10000.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G73690.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 334 13 306 e-138 119.2 69.5 76.3
Subject 398 5 298
Annot | Symbols: CDKD1;1, AT;CDKD;1, CAK3AT | cyclin-dependent kinase D1;1 | chr1:27715113-27717018 FORWARD LENGTH=398
NR ref|NP_001055450.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 334 1 296 e-157 126.9 80.2 83.8
Subject 424 1 296
Annot Os05g0392300 [Oryza sativa Japonica Group] gi|266410|sp|P29620.1|CDKD1_ORYSJ RecName: Full=Cyclin-dependent kinase D-1; Short=CDKD;1; AltName: Full=CDC2+/CDC28-related protein kinase R2; AltName: Full=CDK-activating kinase R2; Short=CAK-R2 gi|20194|emb|CAA41172.1| cdc2+/CDC28-related protein kinase [Oryza sativa Japonica Group] gi|113579001|dbj|BAF17364.1| Os05g0392300 [Oryza sativa Japonica Group] gi|222631483|gb|EEE63615.1| hypothetical protein OsJ_18432 [Oryza sativa Japonica Group]
IRGSP Os02t0123100-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 334 15 296 4e-69 112.6 38.3 53
Subject 376 84 367
Annot
Sbicolor Sobic.009G126600.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 334 13 325 e-152 128.1 78.4 83.2
Subject 428 17 324
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00012.1.g10000.1.sm.mkhc length: 334 aa.
IPR000719 Protein kinase domain
method AccNumber shortName E-value location
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMPfam PF00069 Pkinase 1.2e-67 19-296
ProfileScan PS50011 PROTEIN_KINASE_DOM 42.845 19-299
IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00220 Serine/Threonine 2.5e-89 19-299
IPR008271 Serine/threonine-protein kinase, active site
Molecular Function GO:0004674 protein serine/threonine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
PatternScan PS00108 PROTEIN_KINASE_ST NA 137-149
IPR011009 Protein kinase-like domain
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 3.9e-85 5-295
IPR017441 Protein kinase, ATP binding site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00107 PROTEIN_KINASE_ATP NA 25-49
IPR020635 Tyrosine-protein kinase, catalytic domain
Molecular Function GO:0004713 protein tyrosine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00219 Tyrosine 1e-08 19-297
no_ID  
Gene3D G3DSA:1.10.510.10 no description 3.3e-50 116-308
Gene3D G3DSA:3.30.200.20 no description 7.4e-32 13-115
HMMPanther PTHR24056 CELL 4.9e-177 11-297
HMMPanther PTHR24056:SF0 CELL 4.9e-177 11-297
Seg seg seg NA 4-12
Pseudomolecule
Chromosome Start End Strand
1761999866205172+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00012.1 maker exon 4473637 4473907 . - . ID=Zjn_sc00012.1.g10000.1.sm.mkhc:exon:8
Zjn_sc00012.1 maker exon 4473948 4474155 . - . ID=Zjn_sc00012.1.g10000.1.sm.mkhc:exon:7
Zjn_sc00012.1 maker exon 4474496 4474546 . - . ID=Zjn_sc00012.1.g10000.1.sm.mkhc:exon:6
Zjn_sc00012.1 maker exon 4474643 4474878 . - . ID=Zjn_sc00012.1.g10000.1.sm.mkhc:exon:5
Zjn_sc00012.1 maker exon 4476301 4476426 . - . ID=Zjn_sc00012.1.g10000.1.sm.mkhc:exon:4
Zjn_sc00012.1 maker exon 4477312 4477420 . - . ID=Zjn_sc00012.1.g10000.1.sm.mkhc:exon:3
Zjn_sc00012.1 maker exon 4477513 4477811 . - . ID=Zjn_sc00012.1.g10000.1.sm.mkhc:exon:2
Zjn_sc00012.1 maker exon 4478704 4478823 . - . ID=Zjn_sc00012.1.g10000.1.sm.mkhc:exon:1

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