Z. japonica Nagirizaki
Zjn_sc00012.1.g08880.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G07960.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 670 1 670 0.0 104.3 74.5 82.8
Subject 699 1 699
Annot | Symbols: ATCSLC12, CSLC12 | Cellulose-synthase-like C12 | chr4:4802628-4805114 REVERSE LENGTH=699
NR ref|XP_003568127.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 670 1 670 0.0 102.5 90.3 95.4
Subject 687 1 687
Annot PREDICTED: probable xyloglucan glycosyltransferase 7 [Brachypodium distachyon]
IRGSP Os05t0510800-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 670 1 670 0.0 102.7 93.3 95.8
Subject 688 1 688
Annot
Sbicolor Sobic.009G194200.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 670 1 670 0.0 104 93.9 96.7
Subject 697 1 697
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00012.1.g08880.1.sm.mkhc length: 670 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.90.550.10 no description 1.1e-22 213-464
HMMPanther PTHR32044 FAMILY 0 68-670
HMMPanther PTHR32044:SF0 SUBFAMILY 0 68-670
HMMPfam PF13641 Glyco_tranf_2_3 7.6e-39 214-445
Seg seg seg NA 35-58
70-84
251-260
370-384
467-487
609-616
625-642
superfamily SSF53448 Nucleotide-diphospho-sugar 4.5e-48 210-488
Pseudomolecule
Chromosome Start End Strand
1768012836805126-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00012.1 maker exon 3873683 3873918 . + . ID=Zjn_sc00012.1.g08880.1.sm.mkhc:exon:1
Zjn_sc00012.1 maker exon 3874399 3874840 . + . ID=Zjn_sc00012.1.g08880.1.sm.mkhc:exon:2
Zjn_sc00012.1 maker exon 3875643 3875951 . + . ID=Zjn_sc00012.1.g08880.1.sm.mkhc:exon:3
Zjn_sc00012.1 maker exon 3876043 3876333 . + . ID=Zjn_sc00012.1.g08880.1.sm.mkhc:exon:4
Zjn_sc00012.1 maker exon 3876419 3876532 . + . ID=Zjn_sc00012.1.g08880.1.sm.mkhc:exon:5
Zjn_sc00012.1 maker exon 3876906 3877526 . + . ID=Zjn_sc00012.1.g08880.1.sm.mkhc:exon:6

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