Z. japonica Nagirizaki
Zjn_sc00012.1.g08650.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G20340.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 590 67 558 e-140 83.1 40.5 55.6
Subject 490 11 488
Annot | Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr2:8779804-8782490 FORWARD LENGTH=490
NR ref|XP_012700116.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 590 39 585 0.0 96.9 75.4 80.3
Subject 572 1 559
Annot PREDICTED: tyrosine decarboxylase 1-like [Setaria italica]
IRGSP Os05t0510600-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 590 39 553 0.0 95.8 68.1 73.2
Subject 565 1 516
Annot
Sbicolor Sobic.009G192600.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 590 57 568 0.0 99.7 73.4 78
Subject 588 57 576
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00012.1.g08650.1.am.mk length: 590 aa.
IPR002129 Pyridoxal phosphate-dependent decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0016831 carboxy-lyase activity    
Biological Process GO:0019752 carboxylic acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00282 Pyridoxal_deC 4.1e-118 102-481
IPR010977 Aromatic-L-amino-acid decarboxylase
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0016831 carboxy-lyase activity    
FPrintScan PR00800 YHDCRBOXLASE 2.8e-57 73-92
96-113
142-161
163-181
182-201
207-227
419-434
462-481
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 9.6e-93 154-445
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 4.4e-36 447-559
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 2.8e-120 68-559
IPR021115 Pyridoxal-phosphate binding site
Molecular Function GO:0016831 carboxy-lyase activity    
PatternScan PS00392 DDC_GAD_HDC_YDC NA 360-381
no_ID  
Gene3D G3DSA:1.20.1340.10 no description 2.5e-28 68-150
HMMPanther PTHR11999 GROUP 5.2e-234 67-559
HMMPanther PTHR11999:SF11 AROMATIC 5.2e-234 67-559
Seg seg seg NA 55-70
120-134
157-167
200-215
Pseudomolecule
Chromosome Start End Strand
1769001396901911+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00012.1 maker_non_over exon 3776898 3778670 . - . ID=Zjn_sc00012.1.g08650.1.am.mk:exon:1

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