Z. japonica Nagirizaki
Zjn_sc00012.1.g07090.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G08860.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 566 90 566 0.0 85 61.3 72.1
Subject 481 1 481
Annot | Symbols: PYD4 | PYRIMIDINE 4 | chr3:2696754-2699087 REVERSE LENGTH=481
NR gb|EEC79397.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 566 90 566 0.0 84.8 79 80.6
Subject 480 1 480
Annot hypothetical protein OsI_20323 [Oryza sativa Indica Group]
IRGSP Os05t0475400-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 566 176 566 0.0 69.1 65.7 67.3
Subject 391 1 391
Annot
Sbicolor Sobic.009G172500.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 566 90 566 0.0 84.6 79.3 81.6
Subject 479 1 479
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00012.1.g07090.1.sm.mkhc length: 566 aa.
IPR005814 Aminotransferase class-III
method AccNumber shortName E-value location
Molecular Function GO:0008483 transaminase activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11986 AMINOTRANSFERASE 3.5e-252 79-566
HMMPfam PF00202 Aminotran_3 3e-83 173-502
PatternScan PS00600 AA_TRANSFER_CLASS_3 NA 377-415
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 4.8e-74 204-460
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 5.1e-38 461-565
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 2.7e-121 144-566
no_ID  
HMMPanther PTHR11986:SF23 ALANINE-GLYOXYLATE 3.5e-252 79-566
Seg seg seg NA 79-86
91-129
Pseudomolecule
Chromosome Start End Strand
1777594507764762+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00012.1 maker exon 2914047 2914676 . - . ID=Zjn_sc00012.1.g07090.1.sm.mkhc:exon:10
Zjn_sc00012.1 maker exon 2914779 2914865 . - . ID=Zjn_sc00012.1.g07090.1.sm.mkhc:exon:9
Zjn_sc00012.1 maker exon 2914959 2915072 . - . ID=Zjn_sc00012.1.g07090.1.sm.mkhc:exon:8
Zjn_sc00012.1 maker exon 2915152 2915377 . - . ID=Zjn_sc00012.1.g07090.1.sm.mkhc:exon:7
Zjn_sc00012.1 maker exon 2915472 2915651 . - . ID=Zjn_sc00012.1.g07090.1.sm.mkhc:exon:6
Zjn_sc00012.1 maker exon 2915744 2915887 . - . ID=Zjn_sc00012.1.g07090.1.sm.mkhc:exon:5
Zjn_sc00012.1 maker exon 2916056 2916226 . - . ID=Zjn_sc00012.1.g07090.1.sm.mkhc:exon:4
Zjn_sc00012.1 maker exon 2916335 2916565 . - . ID=Zjn_sc00012.1.g07090.1.sm.mkhc:exon:3
Zjn_sc00012.1 maker exon 2918009 2918364 . - . ID=Zjn_sc00012.1.g07090.1.sm.mkhc:exon:2
Zjn_sc00012.1 maker exon 2919212 2919359 . - . ID=Zjn_sc00012.1.g07090.1.sm.mkhc:exon:1

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