Z. japonica Nagirizaki
Zjn_sc00012.1.g03910.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G78580.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 98 335 e-130 281.2 64.2 68.4
Subject 942 91 328
Annot | Symbols: ATTPS1, TPS1 | trehalose-6-phosphate synthase | chr1:29552495-29557482 REVERSE LENGTH=942
NR ref|XP_004961486.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 1 335 e-170 290.1 88.7 91.3
Subject 972 23 362
Annot PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 [Setaria italica]
IRGSP Os05t0518600-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 231 335 2e-59 69.3 30.7 31
Subject 232 1 105
Annot
Sbicolor Sobic.009G200200.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 1 335 e-167 291.6 88.1 90.7
Subject 977 24 364
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00012.1.g03910.1.sm.mkhc length: 335 aa.
IPR001830 Glycosyl transferase, family 20
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005992 trehalose biosynthetic process    
HMMPfam PF00982 Glyco_transf_20 1.3e-81 100-334
no_ID  
Gene3D G3DSA:3.40.50.2000 no description 2.7e-83 99-334
HMMPanther PTHR10788 TREHALOSE-6-PHOSPHATE 1.4e-96 92-335
Seg seg seg NA 84-96
superfamily SSF53756 UDP-Glycosyltransferase/glycogen 2.2e-63 99-335
Pseudomolecule
Chromosome Start End Strand
1791551719157063-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00012.1 maker exon 1521746 1522148 . + . ID=Zjn_sc00012.1.g03910.1.sm.mkhc:exon:1
Zjn_sc00012.1 maker exon 1522270 1522367 . + . ID=Zjn_sc00012.1.g03910.1.sm.mkhc:exon:2
Zjn_sc00012.1 maker exon 1522485 1522873 . + . ID=Zjn_sc00012.1.g03910.1.sm.mkhc:exon:3
Zjn_sc00012.1 maker exon 1523524 1523638 . + . ID=Zjn_sc00012.1.g03910.1.sm.mkhc:exon:4

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