Z. japonica Nagirizaki
Zjn_sc00012.1.g03060.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G64810.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 224 91 193 2e-33 86.6 28.1 35.7
Subject 194 68 174
Annot | Symbols: WRKY51, ATWRKY51 | WRKY DNA-binding protein 51 | chr5:25908415-25909687 FORWARD LENGTH=194
NR ref|XP_002440147.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 224 1 211 1e-67 97.8 72.8 79
Subject 219 1 215
Annot hypothetical protein SORBIDRAFT_09g026830 [Sorghum bicolor] gi|241945432|gb|EES18577.1| hypothetical protein SORBIDRAFT_09g026830 [Sorghum bicolor]
IRGSP Os05t0537100-00_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 224 1 211 2e-65 98.7 71 75
Subject 221 1 217
Annot
Sbicolor Sobic.009G212800.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 224 1 211 1e-70 97.8 72.8 79
Subject 219 1 215
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00012.1.g03060.1.sm.mkhc length: 224 aa.
IPR003657 DNA-binding WRKY
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
Gene3D G3DSA:2.20.25.80 no description 2.7e-32 114-188
HMMPfam PF03106 WRKY 7.7e-29 128-186
HMMSmart SM00774 DNA 3e-35 128-187
ProfileScan PS50811 WRKY 31.766 123-188
superfamily SSF118290 WRKY 9e-28 119-189
no_ID  
HMMPanther PTHR31221 FAMILY 1.9e-27 99-188
Seg seg seg NA 21-53
88-109
Pseudomolecule
Chromosome Start End Strand
1794567709458045+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00012.1 maker exon 1220764 1221369 . - . ID=Zjn_sc00012.1.g03060.1.sm.mkhc:exon:3
Zjn_sc00012.1 maker exon 1221456 1221584 . - . ID=Zjn_sc00012.1.g03060.1.sm.mkhc:exon:2
Zjn_sc00012.1 maker exon 1221669 1222039 . - . ID=Zjn_sc00012.1.g03060.1.sm.mkhc:exon:1

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