Z. japonica Nagirizaki
Zjn_sc00012.1.g02530.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G29840.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 523 37 519 0.0 100.6 71.3 79.9
Subject 526 37 519
Annot | Symbols: MTO2, TS | Pyridoxal-5'-phosphate-dependent enzyme family protein | chr4:14599434-14601014 REVERSE LENGTH=526
NR ref|XP_008649965.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 523 1 523 0.0 100.4 93.9 96.7
Subject 525 1 525
Annot PREDICTED: threonine synthase, chloroplastic-like [Zea mays] gi|223948915|gb|ACN28541.1| unknown [Zea mays] gi|413946364|gb|AFW79013.1| threonine synthase [Zea mays]
IRGSP Os05t0549700-02_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 523 1 523 0.0 99.6 93.5 95.8
Subject 521 1 521
Annot
Sbicolor Sobic.009G220000.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 523 1 523 0.0 100.6 93.9 95.6
Subject 526 1 526
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00012.1.g02530.1.sm.mk length: 523 aa.
IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site
method AccNumber shortName E-value location
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00165 DEHYDRATASE_SER_THR NA 191-205
IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
HMMPfam PF00291 PALP 4.8e-49 162-472
superfamily SSF53686 Tryptophan 4.1e-117 47-515
IPR004450 Threonine synthase-like
HMMTigr TIGR00260 thrC: 9.4e-62 151-477
no_ID  
Gene3D G3DSA:3.40.50.1100 no description 1e-52 243-487
HMMPanther PTHR10314 SER/THR 0 86-519
HMMPanther PTHR10314:SF50 SUBFAMILY 0 86-519
Seg seg seg NA 2-16
237-246
Pseudomolecule
Chromosome Start End Strand
1796581329659703+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00012.1 maker_non_over exon 1019106 1020677 . - . ID=Zjn_sc00012.1.g02530.1.sm.mk:exon:1

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