Z. japonica Nagirizaki
Zjn_sc00012.1.g02190.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT1G15110.2 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
281 |
1 |
279 |
e-141 |
161.2 |
80.8 |
92.2 |
| Subject |
453 |
81 |
359 |
|
| Annot |
| Symbols: | phosphatidyl serine synthase family protein | chr1:5199594-5201988 FORWARD LENGTH=453 |
| NR |
ref|XP_004961292.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
281 |
1 |
279 |
e-159 |
149.1 |
97.2 |
98.2 |
| Subject |
419 |
75 |
353 |
|
| Annot |
PREDICTED: CDP-diacylglycerol--serine O-phosphatidyltransferase 2 isoform X1 [Setaria italica] |
| IRGSP |
Os05t0554400-01_chr05_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
281 |
1 |
279 |
e-159 |
150.2 |
96.8 |
97.9 |
| Subject |
422 |
79 |
356 |
|
| Annot |
|
| Sbicolor |
Sobic.009G225100.1.p|Chr09|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
281 |
1 |
279 |
e-162 |
150.9 |
97.5 |
98.2 |
| Subject |
424 |
80 |
358 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00012.1.g02190.1.sm.mkhc |
length: 281 aa. |
| IPR004277 |
Phosphatidyl serine synthase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006659 |
phosphatidylserine biosynthetic process |
|
|
| HMMPanther |
PTHR12615 |
PHOSPHATIDYLSERINE |
8.9e-163 |
1-279 |
| HMMPfam |
PF03034 |
PSS |
1.3e-110 |
21-275 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 17 | 9788586 | 9792238 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00012.1 |
maker |
exon |
886571 |
886576 |
. |
- |
. |
ID=Zjn_sc00012.1.g02190.1.sm.mkhc:exon:11 |
| Zjn_sc00012.1 |
maker |
exon |
886742 |
886757 |
. |
- |
. |
ID=Zjn_sc00012.1.g02190.1.sm.mkhc:exon:10 |
| Zjn_sc00012.1 |
maker |
exon |
886878 |
887131 |
. |
- |
. |
ID=Zjn_sc00012.1.g02190.1.sm.mkhc:exon:9 |
| Zjn_sc00012.1 |
maker |
exon |
888014 |
888105 |
. |
- |
. |
ID=Zjn_sc00012.1.g02190.1.sm.mkhc:exon:8 |
| Zjn_sc00012.1 |
maker |
exon |
888501 |
888585 |
. |
- |
. |
ID=Zjn_sc00012.1.g02190.1.sm.mkhc:exon:7 |
| Zjn_sc00012.1 |
maker |
exon |
888671 |
888787 |
. |
- |
. |
ID=Zjn_sc00012.1.g02190.1.sm.mkhc:exon:6 |
| Zjn_sc00012.1 |
maker |
exon |
888889 |
888968 |
. |
- |
. |
ID=Zjn_sc00012.1.g02190.1.sm.mkhc:exon:5 |
| Zjn_sc00012.1 |
maker |
exon |
889067 |
889121 |
. |
- |
. |
ID=Zjn_sc00012.1.g02190.1.sm.mkhc:exon:4 |
| Zjn_sc00012.1 |
maker |
exon |
889271 |
889361 |
. |
- |
. |
ID=Zjn_sc00012.1.g02190.1.sm.mkhc:exon:3 |
| Zjn_sc00012.1 |
maker |
exon |
889761 |
889820 |
. |
- |
. |
ID=Zjn_sc00012.1.g02190.1.sm.mkhc:exon:2 |
| Zjn_sc00012.1 |
maker |
exon |
890158 |
890223 |
. |
- |
. |
ID=Zjn_sc00012.1.g02190.1.sm.mkhc:exon:1 |