Z. japonica Nagirizaki
Zjn_sc00012.1.g01910.1.cf.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G28910.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 459 1 446 1e-48 92.6 35.5 51.2
Subject 425 1 419
Annot | Symbols: NINJA | novel interactor of JAZ | chr4:14264330-14265680 REVERSE LENGTH=425
NR ref|XP_004961252.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 459 1 459 0.0 104.1 79.3 84.7
Subject 478 1 478
Annot PREDICTED: ninja-family protein 8 [Setaria italica]
IRGSP Os05t0558800-02_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 459 1 459 0.0 98.3 77.8 82.8
Subject 451 1 451
Annot
Sbicolor Sobic.009G228700.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 459 1 459 0.0 103.3 79.1 83.9
Subject 474 1 474
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00012.1.g01910.1.cf.mkhc length: 459 aa.
IPR012463 Ninja
method AccNumber shortName E-value location
HMMPfam PF07897 DUF1675 5.6e-19 382-432
no_ID  
HMMPanther PTHR31413 FAMILY 1.6e-13 345-451
HMMPanther PTHR31413:SF0 SUBFAMILY 1.6e-13 345-451
Seg seg seg NA 6-22
239-250
Pseudomolecule
Chromosome Start End Strand
1798804849883446+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00012.1 maker exon 795363 796148 . - . ID=Zjn_sc00012.1.g01910.1.cf.mkhc:exon:3
Zjn_sc00012.1 maker exon 796538 797689 . - . ID=Zjn_sc00012.1.g01910.1.cf.mkhc:exon:2
Zjn_sc00012.1 maker exon 798110 798325 . - . ID=Zjn_sc00012.1.g01910.1.cf.mkhc:exon:1

Top