Z. japonica Nagirizaki
Zjn_sc00012.1.g01810.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G27600.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 300 65 286 1e-30 131.3 25 41.3
Subject 394 170 390
Annot | Symbols: IRX9-L, I9H | Nucleotide-diphospho-sugar transferases superfamily protein | chr1:9604083-9605881 REVERSE LENGTH=394
NR ref|NP_001056301.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 300 1 283 e-114 150.3 70.3 82.3
Subject 451 98 444
Annot Os05g0559600 [Oryza sativa Japonica Group] gi|75119733|sp|Q6AT32.1|GT52_ORYSJ RecName: Full=Probable glucuronosyltransferase Os05g0559600 gi|50878328|gb|AAT85103.1| putative beta3-glucuronyl transferase [Oryza sativa Japonica Group] gi|51854256|gb|AAU10637.1| putative beta3-glucuronosyltransferase [Oryza sativa Japonica Group] gi|113579852|dbj|BAF18215.1| Os05g0559600 [Oryza sativa Japonica Group] gi|215687004|dbj|BAG90818.1| unnamed protein product [Oryza sativa Japonica Group] gi|612340538|gb|AHW98785.1| GT43 family glycosyltransferase E [Oryza sativa Japonica Group]
IRGSP Os05t0559600-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 300 1 283 e-117 150.3 70.3 82.3
Subject 451 98 444
Annot
Sbicolor Sobic.003G254700.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 300 1 277 3e-76 149.3 53 65.3
Subject 448 98 435
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00012.1.g01810.1.sm.mkhc length: 300 aa.
IPR005027 Glycosyl transferase, family 43
method AccNumber shortName E-value location
Molecular Function GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR10896 GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 4e-90 1-278
HMMPfam PF03360 Glyco_transf_43 7.5e-21 149-266
no_ID  
Gene3D G3DSA:3.90.550.10 no description 4.5e-30 97-150
151-279
HMMPanther PTHR10896:SF1 BETA-1,3-GLUCURONYLTRANSFERASE 4e-90 1-278
Seg seg seg NA 42-57
288-300
superfamily SSF53448 Nucleotide-diphospho-sugar 2e-40 98-290
Pseudomolecule
Chromosome Start End Strand
1799113199914179+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00012.1 maker exon 764630 764699 . - . ID=Zjn_sc00012.1.g01810.1.sm.mkhc:exon:4
Zjn_sc00012.1 maker exon 765830 765960 . - . ID=Zjn_sc00012.1.g01810.1.sm.mkhc:exon:3
Zjn_sc00012.1 maker exon 766220 766475 . - . ID=Zjn_sc00012.1.g01810.1.sm.mkhc:exon:2
Zjn_sc00012.1 maker exon 767045 767490 . - . ID=Zjn_sc00012.1.g01810.1.sm.mkhc:exon:1

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