Z. japonica Nagirizaki
Zjn_sc00012.1.g01770.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G24620.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 454 8 454 e-152 115.2 58.4 74.2
Subject 523 84 523
Annot | Symbols: ATROPGEF8, ROPGEF8 | RHO guanyl-nucleotide exchange factor 8 | chr3:8980695-8982793 REVERSE LENGTH=523
NR ref|XP_004961244.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 454 8 454 0.0 120 83.5 91.6
Subject 545 107 545
Annot PREDICTED: rho guanine nucleotide exchange factor 8-like [Setaria italica]
IRGSP Os05t0560100-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 454 8 454 0.0 125.3 80 89.2
Subject 569 113 569
Annot
Sbicolor Sobic.009G229900.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 454 8 454 0.0 121.1 81.1 90.3
Subject 550 108 550
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00012.1.g01770.1.sm.mk length: 454 aa.
IPR005512 PRONE domain
method AccNumber shortName E-value location
Molecular Function GO:0005089 Rho guanyl-nucleotide exchange factor activity    
HMMPfam PF03759 PRONE 3.9e-171 8-360
ProfileScan PS51334 PRONE 108.786 1-364
no_ID  
HMMPanther PTHR32372 FAMILY 1.4e-277 8-453
HMMPanther PTHR32372:SF0 SUBFAMILY 1.4e-277 8-453
Pseudomolecule
Chromosome Start End Strand
1799267809928629-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00012.1 maker_non_over exon 750180 750321 . + . ID=Zjn_sc00012.1.g01770.1.sm.mk:exon:1
Zjn_sc00012.1 maker_non_over exon 750435 750589 . + . ID=Zjn_sc00012.1.g01770.1.sm.mk:exon:2
Zjn_sc00012.1 maker_non_over exon 750668 750742 . + . ID=Zjn_sc00012.1.g01770.1.sm.mk:exon:3
Zjn_sc00012.1 maker_non_over exon 750842 751114 . + . ID=Zjn_sc00012.1.g01770.1.sm.mk:exon:4
Zjn_sc00012.1 maker_non_over exon 751211 751531 . + . ID=Zjn_sc00012.1.g01770.1.sm.mk:exon:5
Zjn_sc00012.1 maker_non_over exon 751631 752029 . + . ID=Zjn_sc00012.1.g01770.1.sm.mk:exon:6

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