Z. japonica Nagirizaki
Zjn_sc00012.1.g01080.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G23810.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 169 68 169 1e-15 191.7 29.6 36.7
Subject 324 114 200
Annot | Symbols: WRKY53, ATWRKY53 | WRKY family transcription factor | chr4:12392666-12393739 REVERSE LENGTH=324
NR ref|XP_002440286.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 169 1 168 3e-40 160.9 57.4 65.1
Subject 272 1 152
Annot hypothetical protein SORBIDRAFT_09g029050 [Sorghum bicolor] gi|241945571|gb|EES18716.1| hypothetical protein SORBIDRAFT_09g029050 [Sorghum bicolor]
IRGSP Os05t0571200-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 169 1 168 2e-39 163.9 53.3 63.9
Subject 277 2 147
Annot
Sbicolor Sobic.009G238200.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 169 1 168 4e-43 160.9 57.4 65.1
Subject 272 1 152
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00012.1.g01080.1.am.mk length: 169 aa.
IPR003657 DNA-binding WRKY
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
Gene3D G3DSA:2.20.25.80 no description 5.9e-15 93-168
HMMPfam PF03106 WRKY 2.9e-08 106-128
HMMSmart SM00774 DNA 3.3e-16 106-169
ProfileScan PS50811 WRKY 14.160 101-169
superfamily SSF118290 WRKY 5.5e-11 97-169
no_ID  
Coil coil coiled-coil NA 11-35
Seg seg seg NA 66-80
Pseudomolecule
Chromosome Start End Strand
171020286010203447+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00012.1 maker_non_over exon 475362 475431 . - . ID=Zjn_sc00012.1.g01080.1.am.mk:exon:2
Zjn_sc00012.1 maker_non_over exon 475510 475949 . - . ID=Zjn_sc00012.1.g01080.1.am.mk:exon:1

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