Z. japonica Nagirizaki
Zjn_sc00012.1.g00390.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G37210.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 259 48 248 3e-86 83 58.7 67.6
Subject 215 5 208
Annot | Symbols: | lysine decarboxylase family protein | chr2:15624253-15626834 REVERSE LENGTH=215
NR ref|XP_004961025.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 259 51 256 e-110 106.9 74.9 78
Subject 277 65 270
Annot PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG-like [Setaria italica]
IRGSP Os05t0591600-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 259 56 256 e-109 102.7 73 75.7
Subject 266 57 259
Annot
Sbicolor Sobic.009G254900.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 259 27 256 e-114 100.4 76.4 83
Subject 260 25 253
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00012.1.g00390.1.sm.mkhc length: 259 aa.
IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG
method AccNumber shortName E-value location
HMMPfam PF03641 Lysine_decarbox 1.3e-45 101-231
HMMTigr TIGR00730 TIGR00730: 1.9e-59 58-234
no_ID  
Gene3D G3DSA:3.40.50.450 no description 1.3e-85 49-240
HMMPanther PTHR31223 FAMILY 2.7e-105 26-252
Seg seg seg NA 2-15
35-50
superfamily SSF102405 MoCo 1.2e-66 52-235
Pseudomolecule
Chromosome Start End Strand
171049369510497343+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00012.1 maker exon 181466 182302 . - . ID=Zjn_sc00012.1.g00390.1.sm.mkhc:exon:7
Zjn_sc00012.1 maker exon 182446 182589 . - . ID=Zjn_sc00012.1.g00390.1.sm.mkhc:exon:6
Zjn_sc00012.1 maker exon 183230 183300 . - . ID=Zjn_sc00012.1.g00390.1.sm.mkhc:exon:5
Zjn_sc00012.1 maker exon 183387 183486 . - . ID=Zjn_sc00012.1.g00390.1.sm.mkhc:exon:4
Zjn_sc00012.1 maker exon 183802 183832 . - . ID=Zjn_sc00012.1.g00390.1.sm.mkhc:exon:3
Zjn_sc00012.1 maker exon 184319 184416 . - . ID=Zjn_sc00012.1.g00390.1.sm.mkhc:exon:2
Zjn_sc00012.1 maker exon 184863 185114 . - . ID=Zjn_sc00012.1.g00390.1.sm.mkhc:exon:1

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