Z. japonica Nagirizaki
Zjn_sc00012.1.g00180.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G21320.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 421 197 420 1e-23 128.3 19 27.3
Subject 540 356 536
Annot | Symbols: | BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT2G25930.1); Has 63 Blast hits to 58 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr3:7499408-7501312 REVERSE LENGTH=540
NR ref|XP_004960992.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 421 87 420 e-135 177.7 62.7 67.2
Subject 748 413 748
Annot PREDICTED: protein EARLY FLOWERING 3-like isoform X1 [Setaria italica]
IRGSP Os06t0142600-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 421 87 420 e-102 180.5 49.2 54.9
Subject 760 431 760
Annot
Sbicolor Sobic.009G257300.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 421 87 420 e-134 177 61.8 67.9
Subject 745 405 744
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00012.1.g00180.1.sm.mkhc length: 421 aa.
no_ID  
method AccNumber shortName E-value location
Seg seg seg NA 54-86
Pseudomolecule
Chromosome Start End Strand
171059829210602803+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00012.1 maker exon 76006 77554 . - . ID=Zjn_sc00012.1.g00180.1.sm.mkhc:exon:2
Zjn_sc00012.1 maker exon 80251 80517 . - . ID=Zjn_sc00012.1.g00180.1.sm.mkhc:exon:1

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