Z. japonica Nagirizaki
Zjn_sc00011.1.g08620.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G49330.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 506 1 91 1e-40 67.6 14.4 16.8
Subject 342 1 91
Annot | Symbols: MYB111, ATMYB111, PFG3 | myb domain protein 111 | chr5:19999147-20001293 REVERSE LENGTH=342
NR ref|XP_004967542.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 506 255 506 2e-48 67.2 28.9 35
Subject 340 88 340
Annot PREDICTED: myb-related protein P-like [Setaria italica]
IRGSP Os01t0305900-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 506 1 91 2e-41 62.6 14.8 17.2
Subject 317 1 91
Annot
Sbicolor Sobic.003G145100.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 506 1 91 3e-43 85 16.6 17.8
Subject 430 70 160
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00011.1.g08620.1.am.mk length: 506 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 1.7e-07 14-61
250-279
HMMSmart SM00717 SANT 6.7e-09 13-63
66-281
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 5.9e-11 5-64
65-90
255-279
superfamily SSF46689 Homeodomain-like 4.7e-07 13-79
244-284
IPR017877 Myb-like domain
ProfileScan PS50090 MYB_LIKE 6.539 62-89
255-279
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 22.810 9-65
no_ID  
HMMPanther PTHR10641 MYB-LIKE 6.2e-76 1-282
HMMPanther PTHR10641:SF203SUBFAMILY NOT 6.2e-76 1-282
Seg seg seg NA 304-339
434-445
Pseudomolecule
Chromosome Start End Strand
573038417307235+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00011.1 maker_non_over exon 4812160 4812292 . + . ID=Zjn_sc00011.1.g08620.1.am.mk:exon:1
Zjn_sc00011.1 maker_non_over exon 4812420 4812587 . + . ID=Zjn_sc00011.1.g08620.1.am.mk:exon:2
Zjn_sc00011.1 maker_non_over exon 4813279 4813579 . + . ID=Zjn_sc00011.1.g08620.1.am.mk:exon:3
Zjn_sc00011.1 maker_non_over exon 4813835 4813996 . + . ID=Zjn_sc00011.1.g08620.1.am.mk:exon:4
Zjn_sc00011.1 maker_non_over exon 4814798 4815554 . + . ID=Zjn_sc00011.1.g08620.1.am.mk:exon:5

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