Z. japonica Nagirizaki
Zjn_sc00011.1.g07250.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G26200.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 456 1 449 0.0 98 69.5 79.4
Subject 447 1 443
Annot | Symbols: ACS7, ATACS7 | 1-amino-cyclopropane-1-carboxylate synthase 7 | chr4:13275307-13276946 FORWARD LENGTH=447
NR ref|XP_006643867.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 456 1 452 0.0 100.2 87.1 92.1
Subject 457 1 448
Annot PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 7-like [Oryza brachyantha]
IRGSP Os05t0319200-00_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 456 1 452 0.0 108.8 80.7 86.6
Subject 496 1 466
Annot
Sbicolor Sobic.003G033900.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 456 1 456 0.0 101.5 88.6 92.3
Subject 463 1 456
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00011.1.g07250.1.sm.mkhc length: 456 aa.
IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00105 AA_TRANSFER_CLASS_1 NA 288-301
IPR004839 Aminotransferase, class I/classII
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 3.1e-94 55-443
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 8.3e-17 103-265
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 1.6e-66 266-450
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 2.5e-112 17-451
no_ID  
FPrintScan PR00753 ACCSYNTHASE 9.3e-84 57-83
131-151
153-174
207-231
243-266
282-306
314-337
HMMPanther PTHR11751 SUBGROUP 5.3e-200 27-453
HMMPanther PTHR11751:SF26 ACC 5.3e-200 27-453
Seg seg seg NA 79-92
193-215
Pseudomolecule
Chromosome Start End Strand
562079466209638-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00011.1 maker exon 3716265 3717141 . - . ID=Zjn_sc00011.1.g07250.1.sm.mkhc:exon:3
Zjn_sc00011.1 maker exon 3717252 3717412 . - . ID=Zjn_sc00011.1.g07250.1.sm.mkhc:exon:2
Zjn_sc00011.1 maker exon 3717498 3717957 . - . ID=Zjn_sc00011.1.g07250.1.sm.mkhc:exon:1

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