Z. japonica Nagirizaki
Zjn_sc00011.1.g05600.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G15730.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 812 1 812 0.0 99.8 78.7 89.4
Subject 810 1 810
Annot | Symbols: PLDALPHA1, PLD | phospholipase D alpha 1 | chr3:5330835-5333474 FORWARD LENGTH=810
NR ref|NP_001042153.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 812 1 812 0.0 100 90.6 96.9
Subject 812 1 812
Annot Os01g0172400 [Oryza sativa Japonica Group] gi|108935871|sp|Q43007.2|PLDA1_ORYSJ RecName: Full=Phospholipase D alpha 1; Short=PLD alpha 1; AltName: Full=Choline phosphatase 1; AltName: Full=Phosphatidylcholine-hydrolyzing phospholipase D 1; Flags: Precursor gi|113531684|dbj|BAF04067.1| Os01g0172400 [Oryza sativa Japonica Group] gi|222617827|gb|EEE53959.1| hypothetical protein OsJ_00559 [Oryza sativa Japonica Group]
IRGSP Os01t0172400-03_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 812 1 812 0.0 100 90.6 96.9
Subject 812 1 812
Annot
Sbicolor Sobic.003G050400.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 812 1 812 0.0 100 92.4 97
Subject 812 1 812
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00011.1.g05600.1.sm.mkhc length: 812 aa.
IPR000008 C2 calcium-dependent membrane targeting
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00168 C2 1.2e-11 10-113
HMMSmart SM00239 Protein 1.3e-11 9-129
IPR001736 Phospholipase D/Transphosphatidylase
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF00614 PLDc 5.1e-08 330-368
659-685
HMMSmart SM00155 Phospholipase 1.1e-08 330-368
658-685
ProfileScan PS50035 PLD 15.418 330-368
658-685
IPR008973 C2 calcium/lipid-binding domain, CaLB
Molecular Function GO:0005515 protein binding    
superfamily SSF49562 C2 1.4e-18 3-156
IPR011402 Phospholipase D, plant
Molecular Function GO:0004630 phospholipase D activity    
Molecular Function GO:0005509 calcium ion binding    
Cellular Component GO:0016020 membrane    
Biological Process GO:0046470 phosphatidylcholine metabolic process    
HMMPIR PIRSF036470 Phospholipase 0 1-812
IPR015679 Phospholipase D family
HMMPanther PTHR18896 PHOSPHOLIPASE 0 16-805
IPR024632 Phospholipase D, C-terminal
HMMPfam PF12357 PLD_C 2.5e-32 729-803
no_ID  
Gene3D G3DSA:2.60.40.150 no description 1.9e-12 8-152
Gene3D G3DSA:3.30.870.10 no description 1.4e-15 404-438
504-697
HMMPanther PTHR18896:SF11 PHOPHOLIPASE 0 16-805
Seg seg seg NA 633-645
superfamily SSF56024 Phospholipase 1e-33 151-454
479-742
Pseudomolecule
Chromosome Start End Strand
552032685207581-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00011.1 maker exon 2711587 2712430 . - . ID=Zjn_sc00011.1.g05600.1.sm.mkhc:exon:4
Zjn_sc00011.1 maker exon 2712955 2714851 . - . ID=Zjn_sc00011.1.g05600.1.sm.mkhc:exon:3
Zjn_sc00011.1 maker exon 2715213 2715361 . - . ID=Zjn_sc00011.1.g05600.1.sm.mkhc:exon:2
Zjn_sc00011.1 maker exon 2715625 2715900 . - . ID=Zjn_sc00011.1.g05600.1.sm.mkhc:exon:1

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