Z. japonica Nagirizaki
Zjn_sc00011.1.g04440.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G55360.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 498 183 447 e-132 62.2 43.6 47.6
Subject 310 24 288
Annot | Symbols: CER10, ECR, ATTSC13, TSC13 | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein | chr3:20521186-20522856 REVERSE LENGTH=310
NR ref|XP_004968214.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 498 183 447 e-149 62.2 50.8 52.6
Subject 310 24 288
Annot PREDICTED: very-long-chain enoyl-CoA reductase [Setaria italica]
IRGSP Os01t0150000-02_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 498 183 447 e-149 62.2 49.6 52.4
Subject 310 24 288
Annot
Sbicolor Sobic.003G071600.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 498 87 447 e-154 90.6 55.8 59.2
Subject 451 86 429
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00011.1.g04440.1.am.mk length: 498 aa.
IPR001104 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
method AccNumber shortName E-value location
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006629 lipid metabolic process    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
HMMPfam PF02544 Steroid_dh 9.2e-25 318-448
ProfileScan PS50244 S5A_REDUCTASE 22.410 358-439
no_ID  
HMMPanther PTHR10556 3-OXO-5-ALPHA-STEROID 8.1e-122 183-448
HMMPanther PTHR10556:SF28 ENOYL 8.1e-122 183-448
Seg seg seg NA 19-30
107-125
145-157
163-170
Pseudomolecule
Chromosome Start End Strand
546315694636846-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00011.1 maker_non_over exon 2139888 2140798 . - . ID=Zjn_sc00011.1.g04440.1.am.mk:exon:5
Zjn_sc00011.1 maker_non_over exon 2143812 2143851 . - . ID=Zjn_sc00011.1.g04440.1.am.mk:exon:4
Zjn_sc00011.1 maker_non_over exon 2143922 2144296 . - . ID=Zjn_sc00011.1.g04440.1.am.mk:exon:3
Zjn_sc00011.1 maker_non_over exon 2144916 2144995 . - . ID=Zjn_sc00011.1.g04440.1.am.mk:exon:2
Zjn_sc00011.1 maker_non_over exon 2145075 2145165 . - . ID=Zjn_sc00011.1.g04440.1.am.mk:exon:1

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