Z. japonica Nagirizaki
Zjn_sc00011.1.g03760.1.am.mk
Sequence
-
BLAST
| TAIR10 |
AT1G73805.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
451 |
2 |
379 |
1e-84 |
100 |
39 |
54.3 |
| Subject |
451 |
3 |
371 |
|
| Annot |
| Symbols: | Calmodulin binding protein-like | chr1:27745761-27749178 REVERSE LENGTH=451 |
| NR |
ref|XP_002457419.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
451 |
3 |
451 |
e-170 |
100 |
68.7 |
78.5 |
| Subject |
451 |
5 |
451 |
|
| Annot |
hypothetical protein SORBIDRAFT_03g007000 [Sorghum bicolor] gi|241929394|gb|EES02539.1| hypothetical protein SORBIDRAFT_03g007000 [Sorghum bicolor] |
| IRGSP |
Os01t0134700-01_chr01_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
451 |
2 |
451 |
e-166 |
97.1 |
66.1 |
77.4 |
| Subject |
438 |
3 |
438 |
|
| Annot |
|
| Sbicolor |
Sobic.003G083200.1.p|Chr03|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
451 |
3 |
451 |
e-173 |
100 |
68.7 |
78.5 |
| Subject |
451 |
5 |
451 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00011.1.g03760.1.am.mk |
length: 451 aa. |
| IPR012416 |
Calmodulin binding protein-like |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07887 |
Calmodulin_bind |
7.4e-106 |
92-386 |
| no_ID |
|
| HMMPanther |
PTHR31713 |
FAMILY |
9.7e-122 |
17-449 |
| HMMPanther |
PTHR31713:SF0 |
SUBFAMILY |
9.7e-122 |
17-449 |
| Seg |
seg |
seg |
NA |
7-18 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 5 | 4310691 | 4312615 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00011.1 |
maker_non_over |
exon |
1819010 |
1819095 |
. |
+ |
. |
ID=Zjn_sc00011.1.g03760.1.am.mk:exon:1 |
| Zjn_sc00011.1 |
maker_non_over |
exon |
1819206 |
1819302 |
. |
+ |
. |
ID=Zjn_sc00011.1.g03760.1.am.mk:exon:2 |
| Zjn_sc00011.1 |
maker_non_over |
exon |
1819382 |
1819434 |
. |
+ |
. |
ID=Zjn_sc00011.1.g03760.1.am.mk:exon:3 |
| Zjn_sc00011.1 |
maker_non_over |
exon |
1819533 |
1820184 |
. |
+ |
. |
ID=Zjn_sc00011.1.g03760.1.am.mk:exon:4 |
| Zjn_sc00011.1 |
maker_non_over |
exon |
1820293 |
1820487 |
. |
+ |
. |
ID=Zjn_sc00011.1.g03760.1.am.mk:exon:5 |
| Zjn_sc00011.1 |
maker_non_over |
exon |
1820576 |
1820687 |
. |
+ |
. |
ID=Zjn_sc00011.1.g03760.1.am.mk:exon:6 |
| Zjn_sc00011.1 |
maker_non_over |
exon |
1820774 |
1820934 |
. |
+ |
. |
ID=Zjn_sc00011.1.g03760.1.am.mk:exon:7 |