Z. japonica Nagirizaki
Zjn_sc00011.1.g02690.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G40280.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 451 4 450 e-131 106.9 52.1 69.4
Subject 482 23 480
Annot | Symbols: ERA1, ATFTB, WIG | Prenyltransferase family protein | chr5:16101391-16104783 FORWARD LENGTH=482
NR ref|XP_002458458.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 451 1 451 0.0 100 83.4 90.7
Subject 451 1 451
Annot hypothetical protein SORBIDRAFT_03g034000 [Sorghum bicolor] gi|241930433|gb|EES03578.1| hypothetical protein SORBIDRAFT_03g034000 [Sorghum bicolor]
IRGSP Os01t0737800-02_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 451 20 449 0.0 106 78.5 86
Subject 478 54 477
Annot
Sbicolor Sobic.003G289400.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 451 1 451 0.0 116.2 83.4 90.7
Subject 524 74 524
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00011.1.g02690.1.am.mkhc length: 451 aa.
IPR001330 Prenyltransferase/squalene oxidase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF00432 Prenyltrans 6.4e-07 261-299
364-400
IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 1.7e-117 3-451
IPR026872 Protein farnesyltransferase subunit beta
Cellular Component GO:0005965 protein farnesyltransferase complex    
Biological Process GO:0018343 protein farnesylation    
Biological Process GO:0042127 regulation of cell proliferation    
HMMPanther PTHR11774:SF6 PROTEIN 1.1e-197 14-451
no_ID  
Gene3D G3DSA:1.50.10.20 no description 4.2e-132 349-450
HMMPanther PTHR11774 GERANYLGERANYL 1.1e-197 14-451
HMMPfam PF13249 Prenyltrans_2 1.7e-15 116-228
Seg seg seg NA 100-119
127-134
Pseudomolecule
Chromosome Start End Strand
51456224614568355-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00011.1 maker exon 1297475 1298231 . - . ID=Zjn_sc00011.1.g02690.1.am.mkhc:exon:15
Zjn_sc00011.1 maker exon 1298314 1298417 . - . ID=Zjn_sc00011.1.g02690.1.am.mkhc:exon:14
Zjn_sc00011.1 maker exon 1298943 1299081 . - . ID=Zjn_sc00011.1.g02690.1.am.mkhc:exon:13
Zjn_sc00011.1 maker exon 1299146 1299232 . - . ID=Zjn_sc00011.1.g02690.1.am.mkhc:exon:12
Zjn_sc00011.1 maker exon 1300397 1300469 . - . ID=Zjn_sc00011.1.g02690.1.am.mkhc:exon:11
Zjn_sc00011.1 maker exon 1300543 1300599 . - . ID=Zjn_sc00011.1.g02690.1.am.mkhc:exon:10
Zjn_sc00011.1 maker exon 1300722 1300786 . - . ID=Zjn_sc00011.1.g02690.1.am.mkhc:exon:9
Zjn_sc00011.1 maker exon 1300856 1300907 . - . ID=Zjn_sc00011.1.g02690.1.am.mkhc:exon:8
Zjn_sc00011.1 maker exon 1300994 1301047 . - . ID=Zjn_sc00011.1.g02690.1.am.mkhc:exon:7
Zjn_sc00011.1 maker exon 1301125 1301207 . - . ID=Zjn_sc00011.1.g02690.1.am.mkhc:exon:6
Zjn_sc00011.1 maker exon 1301706 1301741 . - . ID=Zjn_sc00011.1.g02690.1.am.mkhc:exon:5
Zjn_sc00011.1 maker exon 1302382 1302487 . - . ID=Zjn_sc00011.1.g02690.1.am.mkhc:exon:4
Zjn_sc00011.1 maker exon 1302586 1302672 . - . ID=Zjn_sc00011.1.g02690.1.am.mkhc:exon:3
Zjn_sc00011.1 maker exon 1303107 1303389 . - . ID=Zjn_sc00011.1.g02690.1.am.mkhc:exon:2
Zjn_sc00011.1 maker exon 1303503 1303584 . - . ID=Zjn_sc00011.1.g02690.1.am.mkhc:exon:1

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