Z. japonica Nagirizaki
Zjn_sc00011.1.g01010.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G17190.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 172 16 90 2e-21 198.8 25.6 33.7
Subject 342 5 79
Annot | Symbols: FPS2 | farnesyl diphosphate synthase 2 | chr4:9648743-9650865 REVERSE LENGTH=342
NR ref|XP_002456217.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 172 2 90 6e-36 207 44.8 45.9
Subject 356 4 93
Annot hypothetical protein SORBIDRAFT_03g032280 [Sorghum bicolor] gi|241928192|gb|EES01337.1| hypothetical protein SORBIDRAFT_03g032280 [Sorghum bicolor]
IRGSP Os01t0703400-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 172 1 90 2e-35 205.2 40.7 45.9
Subject 353 1 90
Annot
Sbicolor Sobic.003G270500.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 172 2 90 9e-39 207 44.8 45.9
Subject 356 4 93
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00011.1.g01010.1.sm.mk length: 172 aa.
IPR008949 Terpenoid synthase
method AccNumber shortName E-value location
Gene3D G3DSA:1.10.600.10 no description 2e-08 17-92
superfamily SSF48576 Terpenoid 0.0049 16-91
138-172
no_ID  
HMMPanther PTHR11525 FARNESYL-PYROPHOSPHATE 2.5e-20 16-90
HMMPanther PTHR11525:SF0 SUBFAMILY 2.5e-20 16-90
Pseudomolecule
Chromosome Start End Strand
51383424913838282+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00011.1 maker_non_over exon 569478 569621 . + . ID=Zjn_sc00011.1.g01010.1.sm.mk:exon:1
Zjn_sc00011.1 maker_non_over exon 570866 570993 . + . ID=Zjn_sc00011.1.g01010.1.sm.mk:exon:2
Zjn_sc00011.1 maker_non_over exon 571117 571203 . + . ID=Zjn_sc00011.1.g01010.1.sm.mk:exon:3
Zjn_sc00011.1 maker_non_over exon 572010 572061 . + . ID=Zjn_sc00011.1.g01010.1.sm.mk:exon:4
Zjn_sc00011.1 maker_non_over exon 573404 573511 . + . ID=Zjn_sc00011.1.g01010.1.sm.mk:exon:5

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