Z. japonica Nagirizaki
Zjn_sc00011.1.g00660.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G29840.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 521 46 518 0.0 101 71 78.9
Subject 526 52 520
Annot | Symbols: MTO2, TS | Pyridoxal-5'-phosphate-dependent enzyme family protein | chr4:14599434-14601014 REVERSE LENGTH=526
NR ref|XP_002458353.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 521 4 521 0.0 101.7 93.1 96
Subject 530 2 530
Annot hypothetical protein SORBIDRAFT_03g031880 [Sorghum bicolor] gi|241930328|gb|EES03473.1| hypothetical protein SORBIDRAFT_03g031880 [Sorghum bicolor]
IRGSP Os01t0693800-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 521 1 521 0.0 100.8 91.2 93.9
Subject 525 1 525
Annot
Sbicolor Sobic.003G265400.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 521 4 521 0.0 101.7 93.1 96
Subject 530 2 530
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00011.1.g00660.1.am.mk length: 521 aa.
IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site
method AccNumber shortName E-value location
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00165 DEHYDRATASE_SER_THR NA 189-203
IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
HMMPfam PF00291 PALP 3.3e-50 160-470
superfamily SSF53686 Tryptophan 4.2e-117 77-513
IPR004450 Threonine synthase-like
HMMTigr TIGR00260 thrC: 1.8e-62 148-475
no_ID  
Gene3D G3DSA:3.40.50.1100 no description 3.1e-52 241-485
HMMPanther PTHR10314 SER/THR 0 84-517
HMMPanther PTHR10314:SF50 SUBFAMILY 0 84-517
Seg seg seg NA 4-17
33-48
235-244
Pseudomolecule
Chromosome Start End Strand
51363615013637715-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00011.1 maker_non_over exon 371379 372944 . - . ID=Zjn_sc00011.1.g00660.1.am.mk:exon:1

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