Z. japonica Nagirizaki
Zjn_sc00011.1.g00300.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G65790.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 318 1 127 1e-58 117.6 29.6 36.2
Subject 374 1 127
Annot | Symbols: ATMYB68, MYB68 | myb domain protein 68 | chr5:26323035-26324385 FORWARD LENGTH=374
NR ref|XP_004969571.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 318 1 318 4e-96 96.9 66 73.3
Subject 308 1 308
Annot PREDICTED: transcription factor RAX2-like [Setaria italica]
IRGSP Os05t0553400-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 318 1 318 8e-70 90.9 54.4 63.2
Subject 289 1 289
Annot
Sbicolor Sobic.003G260300.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 318 1 318 e-102 140.6 67.9 74.8
Subject 447 115 447
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00011.1.g00300.1.sm.mkhc length: 318 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 4.2e-09 14-62
71-111
HMMSmart SM00717 SANT 2.4e-11 13-64
67-115
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 7.7e-21 15-69
70-116
superfamily SSF46689 Homeodomain-like 2.5e-25 14-114
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 14.987 9-66
67-117
no_ID  
HMMPanther PTHR10641 MYB-LIKE 5.5e-83 1-292
HMMPanther PTHR10641:SF30 MYB 5.5e-83 1-292
Seg seg seg NA 136-147
151-168
195-210
Pseudomolecule
Chromosome Start End Strand
51339842113399835+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00011.1 maker exon 133650 133874 . + . ID=Zjn_sc00011.1.g00300.1.sm.mkhc:exon:1
Zjn_sc00011.1 maker exon 134013 135064 . + . ID=Zjn_sc00011.1.g00300.1.sm.mkhc:exon:2

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