Z. japonica Nagirizaki
Zjn_sc00011.1.g00150.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G53460.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1232 611 970 0.0 179.2 25.3 27.8
Subject 2208 1045 1404
Annot | Symbols: GLT1 | NADH-dependent glutamate synthase 1 | chr5:21700518-21709629 FORWARD LENGTH=2208
NR ref|XP_003566997.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1232 552 978 0.0 175.6 31.4 33
Subject 2163 905 1389
Annot PREDICTED: glutamate synthase 1 [NADH], chloroplastic [Brachypodium distachyon]
IRGSP Os01t0682001-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1232 1 359 e-140 45.2 22.2 24.3
Subject 557 1 382
Annot
Sbicolor Sobic.003G258800.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1232 552 970 0.0 175.6 30.7 32.1
Subject 2163 905 1381
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00011.1.g00150.1.sm.mkhc length: 1232 aa.
IPR000583 Class II glutamine amidotransferase domain
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
HMMPfam PF00310 GATase_2 8.7e-06 96-359
360-393
IPR002932 Glutamate synthase, central-C
Biological Process GO:0006537 glutamate biosynthetic process    
Molecular Function GO:0015930 glutamate synthase activity    
Molecular Function GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01645 Glu_synthase 3.6e-128 598-884
IPR006982 Glutamate synthase, central-N
Biological Process GO:0006807 nitrogen compound metabolic process    
Molecular Function GO:0015930 glutamate synthase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF04898 Glu_syn_central 3.4e-54 409-555
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:3.20.20.70 no description 1.7e-167 561-924
IPR017932 Glutamine amidotransferase type 2 domain
ProfileScan PS51278 GATASE_TYPE_2 10.841 96-1232
no_ID  
Coil coil coiled-coil NA 531-552
586-607
FPrintScan PR00419 ADXRDTASE 9.6e-13 991-1013
1014-1027
Gene3D G3DSA:3.50.50.60 no description 6.9e-43 987-1212
Gene3D G3DSA:3.60.20.10 no description 1.5e-15 96-297
360-409
HMMPanther PTHR11938 FAD 0 81-970
HMMPanther PTHR11938:SF1 GLUTAMATE 0 81-970
HMMPfam PF13450 NAD_binding_8 4.6e-08 994-1028
Seg seg seg NA 18-33
234-247
391-404
729-742
984-995
superfamily SSF51395 FMN-linked 3.2e-171 407-935
superfamily SSF51905 FAD/NAD(P)-binding 1.4e-40 985-1211
superfamily SSF56235 N-terminal 5.6e-84 96-442
Pseudomolecule
Chromosome Start End Strand
51333034513341139-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00011.1 maker exon 65574 65903 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:18
Zjn_sc00011.1 maker exon 65995 66249 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:17
Zjn_sc00011.1 maker exon 66881 67100 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:16
Zjn_sc00011.1 maker exon 68038 68093 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:15
Zjn_sc00011.1 maker exon 69073 69834 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:14
Zjn_sc00011.1 maker exon 70088 70249 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:13
Zjn_sc00011.1 maker exon 70369 70523 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:12
Zjn_sc00011.1 maker exon 71736 71912 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:11
Zjn_sc00011.1 maker exon 72709 73140 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:10
Zjn_sc00011.1 maker exon 73585 73728 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:9
Zjn_sc00011.1 maker exon 74069 74172 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:8
Zjn_sc00011.1 maker exon 74590 74672 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:7
Zjn_sc00011.1 maker exon 74879 74975 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:6
Zjn_sc00011.1 maker exon 75197 75297 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:5
Zjn_sc00011.1 maker exon 75379 75531 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:4
Zjn_sc00011.1 maker exon 75631 75744 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:3
Zjn_sc00011.1 maker exon 75854 75943 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:2
Zjn_sc00011.1 maker exon 76033 76368 . - . ID=Zjn_sc00011.1.g00150.1.sm.mkhc:exon:1

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