Z. japonica Nagirizaki
Zjn_sc00010.1.g03790.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G17050.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 281 118 272 2e-63 148.4 40.2 47.3
Subject 417 233 387
Annot | Symbols: SPS2 | solanesyl diphosphate synthase 2 | chr1:5829289-5831215 FORWARD LENGTH=417
NR ref|XP_004962526.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 281 118 271 4e-76 151.6 50.5 52
Subject 426 242 395
Annot PREDICTED: probable solanesyl-diphosphate synthase 3, chloroplastic [Setaria italica]
IRGSP Os12t0271700-02_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 281 118 272 2e-78 132.4 49.5 52.3
Subject 372 188 342
Annot
Sbicolor Sobic.K001400.1.p|super_11|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 281 118 271 8e-79 174 50.2 52.3
Subject 489 305 458
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00010.1.g03790.1.sm.mkhc length: 281 aa.
IPR000092 Polyprenyl synthetase
method AccNumber shortName E-value location
Biological Process GO:0008299 isoprenoid biosynthetic process    
HMMPfam PF00348 polyprenyl_synt 2.8e-33 116-244
PatternScan PS00444 POLYPRENYL_SYNTHASE_2 NA 186-198
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 6.7e-45 109-271
superfamily SSF48576 Terpenoid 1.5e-36 120-266
IPR014120 Solanesyl diphosphate synthase
Biological Process GO:0015979 photosynthesis    
Molecular Function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups    
HMMPanther PTHR12001:SF18 SOLANESYL 3.1e-107 121-271
IPR017446 Polyprenyl synthetase-related
HMMPanther PTHR12001 GERANYLGERANYL 3.1e-107 121-271
no_ID  
Seg seg seg NA 2-18
53-64
95-114
Pseudomolecule
Chromosome Start End Strand
1634659893469210-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00010.1 maker exon 3465989 3466023 . - . ID=Zjn_sc00010.1.g03790.1.sm.mkhc:exon:4
Zjn_sc00010.1 maker exon 3466337 3466787 . - . ID=Zjn_sc00010.1.g03790.1.sm.mkhc:exon:3
Zjn_sc00010.1 maker exon 3468762 3468889 . - . ID=Zjn_sc00010.1.g03790.1.sm.mkhc:exon:2
Zjn_sc00010.1 maker exon 3468979 3469210 . - . ID=Zjn_sc00010.1.g03790.1.sm.mkhc:exon:1

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