Z. japonica Nagirizaki
Zjn_sc00010.1.g03190.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G24830.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 346 17 344 e-130 142.8 69.4 81.8
Subject 494 81 492
Annot | Symbols: | arginosuccinate synthase family | chr4:12793085-12795857 REVERSE LENGTH=494
NR gb|AFW56723.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 346 1 346 0.0 121.4 91.6 96.2
Subject 420 52 420
Annot hypothetical protein ZEAMMB73_271426 [Zea mays]
IRGSP Os12t0235800-01_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 346 1 346 e-160 139 85.3 91.6
Subject 481 50 481
Annot
Sbicolor Sobic.008G083400.1.p|Chr08|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 346 1 346 e-173 139.9 90.2 95.4
Subject 484 55 484
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00010.1.g03190.1.am.mkhc length: 346 aa.
IPR001518 Argininosuccinate synthase
method AccNumber shortName E-value location
Molecular Function GO:0004055 argininosuccinate synthase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006526 arginine biosynthetic process    
HMMPanther PTHR11587 ARGININOSUCCINATE 3.3e-141 27-344
HMMPfam PF00764 Arginosuc_synth 4.4e-71 36-70
70-133
133-338
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
Gene3D G3DSA:3.40.50.620 no description 3.8e-20 33-69
70-135
IPR018223 Argininosuccinate synthase, conserved site
Molecular Function GO:0004055 argininosuccinate synthase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006526 arginine biosynthetic process    
PatternScan PS00564 ARGININOSUCCIN_SYN_1 NA 38-46
PatternScan PS00565 ARGININOSUCCIN_SYN_2 NA 86-97
IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body
Molecular Function GO:0004055 argininosuccinate synthase activity    
Gene3D G3DSA:3.90.1260.10 no description 2.9e-82 136-344
no_ID  
superfamily SSF52402 Adenine 2.9e-28 33-133
superfamily SSF69864 Argininosuccinate 1.6e-80 127-344
Pseudomolecule
Chromosome Start End Strand
1629449942948280+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00010.1 maker exon 2944994 2945151 . + . ID=Zjn_sc00010.1.g03190.1.am.mkhc:exon:1
Zjn_sc00010.1 maker exon 2945256 2945304 . + . ID=Zjn_sc00010.1.g03190.1.am.mkhc:exon:2
Zjn_sc00010.1 maker exon 2946657 2946731 . + . ID=Zjn_sc00010.1.g03190.1.am.mkhc:exon:3
Zjn_sc00010.1 maker exon 2946803 2946919 . + . ID=Zjn_sc00010.1.g03190.1.am.mkhc:exon:4
Zjn_sc00010.1 maker exon 2947203 2947291 . + . ID=Zjn_sc00010.1.g03190.1.am.mkhc:exon:5
Zjn_sc00010.1 maker exon 2947380 2948280 . + . ID=Zjn_sc00010.1.g03190.1.am.mkhc:exon:6

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