Z. japonica Nagirizaki
Zjn_sc00010.1.g01820.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G13740.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 319 4 318 2e-43 109.1 40.1 54.2
Subject 348 30 348
Annot | Symbols: AFP2 | ABI five binding protein 2 | chr1:4713969-4715158 FORWARD LENGTH=348
NR ref|XP_004984009.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 319 24 315 3e-99 98.7 71.2 76.2
Subject 315 38 313
Annot PREDICTED: ninja-family protein 6-like [Setaria italica]
IRGSP Os03t0419100-02_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 319 1 319 4e-89 96.2 70.8 78.1
Subject 307 1 307
Annot
Sbicolor Sobic.001G335400.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 319 1 315 2e-94 97.8 73.7 79.9
Subject 312 1 310
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00010.1.g01820.1.sm.mkhc length: 319 aa.
IPR012463 Ninja
method AccNumber shortName E-value location
HMMPfam PF07897 DUF1675 3.7e-79 27-310
no_ID  
HMMPanther PTHR31413 FAMILY 1.6e-88 11-319
HMMPanther PTHR31413:SF0 SUBFAMILY 1.6e-88 11-319
Seg seg seg NA 9-23
30-38
52-63
67-88
89-116
146-157
187-200
224-239
Pseudomolecule
Chromosome Start End Strand
193462739349456-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00010.1 maker exon 1574483 1575246 . + . ID=Zjn_sc00010.1.g01820.1.sm.mkhc:exon:1
Zjn_sc00010.1 maker exon 1576406 1576425 . + . ID=Zjn_sc00010.1.g01820.1.sm.mkhc:exon:2
Zjn_sc00010.1 maker exon 1576506 1577666 . + . ID=Zjn_sc00010.1.g01820.1.sm.mkhc:exon:3

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