Z. japonica Nagirizaki
Zjn_sc00010.1.g00180.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
No_hits |
| NR |
ref|XP_010229630.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
466 |
13 |
419 |
8e-34 |
95.3 |
30.7 |
43.1 |
| Subject |
444 |
6 |
428 |
|
| Annot |
PREDICTED: uncharacterized protein LOC104582045 [Brachypodium distachyon] |
| IRGSP |
Os10t0396100-01_chr10_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
466 |
6 |
419 |
3e-30 |
91.2 |
28.8 |
44.6 |
| Subject |
425 |
1 |
403 |
|
| Annot |
|
| Sbicolor |
Sobic.009G250600.1.p|Chr09|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
466 |
8 |
354 |
2e-13 |
77.7 |
20.8 |
30.9 |
| Subject |
362 |
5 |
321 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00010.1.g00180.1.sm.mk |
length: 466 aa. |
| IPR001810 |
F-box domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00646 |
F-box |
4.6e-09 |
14-49 |
| HMMSmart |
SM00256 |
A |
3e-05 |
14-54 |
| ProfileScan |
PS50181 |
FBOX |
8.941 |
8-54 |
| superfamily |
SSF81383 |
F-box |
8.3e-14 |
1-67 |
| IPR006527 |
F-box associated domain, type 1 |
| HMMPfam |
PF07734 |
FBA_1 |
7.3e-07 |
257-340 |
| IPR017451 |
F-box associated interaction domain |
| HMMTigr |
TIGR01640 |
F_box_assoc_1: |
6.1e-11 |
147-341 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1280.50 |
no description |
6.6e-09 |
7-48 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 1 | 10664656 | 10666056 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00010.1 |
maker_non_over |
exon |
257883 |
259283 |
. |
- |
. |
ID=Zjn_sc00010.1.g00180.1.sm.mk:exon:1 |