Z. japonica Nagirizaki
Zjn_sc00009.1.g11480.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G46240.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 430 37 422 e-160 157.4 63.3 75.3
Subject 677 32 433
Annot | Symbols: KAT1 | potassium channel in Arabidopsis thaliana 1 | chr5:18743652-18746561 REVERSE LENGTH=677
NR ref|XP_004970003.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 430 1 423 0.0 117.4 84 90
Subject 505 1 436
Annot PREDICTED: potassium channel KAT3-like [Setaria italica]
IRGSP Os01t0756700-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 430 11 423 0.0 116.7 79.8 86.7
Subject 502 10 438
Annot
Sbicolor Sobic.003G300600.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 430 1 423 0.0 123.3 82.3 88.8
Subject 530 1 441
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00009.1.g11480.1.sm.mk length: 430 aa.
IPR000595 Cyclic nucleotide-binding domain
method AccNumber shortName E-value location
ProfileScan PS50042 CNMP_BINDING_3 8.449 382-425
IPR003938 Potassium channel, voltage-dependent, EAG/ELK/ERG
Molecular Function GO:0005249 voltage-gated potassium channel activity    
Biological Process GO:0006813 potassium ion transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR01463 EAGCHANLFMLY 1.4e-08 103-113
114-123
255-272
281-292
299-308
IPR005821 Ion transport domain
Molecular Function GO:0005216 ion channel activity    
Biological Process GO:0006811 ion transport    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00520 Ion_trans 5.1e-25 102-303
IPR018490 Cyclic nucleotide-binding-like
superfamily SSF51206 cAMP-binding 1.6e-17 311-414
no_ID  
Gene3D G3DSA:1.10.287.70 no description 2.6e-40 68-307
HMMPanther PTHR10217 VOLTAGE 8.3e-117 60-414
HMMPanther PTHR10217:SF7 CYCLIC 8.3e-117 60-414
Seg seg seg NA 178-189
superfamily SSF81324 Voltage-gated 2.1e-42 61-316
Pseudomolecule
Chromosome Start End Strand
51509439215096387+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00009.1 maker_non_over exon 4874567 4874626 . - . ID=Zjn_sc00009.1.g11480.1.sm.mk:exon:8
Zjn_sc00009.1 maker_non_over exon 4874736 4874834 . - . ID=Zjn_sc00009.1.g11480.1.sm.mk:exon:7
Zjn_sc00009.1 maker_non_over exon 4874979 4875161 . - . ID=Zjn_sc00009.1.g11480.1.sm.mk:exon:6
Zjn_sc00009.1 maker_non_over exon 4875260 4875577 . - . ID=Zjn_sc00009.1.g11480.1.sm.mk:exon:5
Zjn_sc00009.1 maker_non_over exon 4875670 4875727 . - . ID=Zjn_sc00009.1.g11480.1.sm.mk:exon:4
Zjn_sc00009.1 maker_non_over exon 4875823 4875978 . - . ID=Zjn_sc00009.1.g11480.1.sm.mk:exon:3
Zjn_sc00009.1 maker_non_over exon 4876046 4876261 . - . ID=Zjn_sc00009.1.g11480.1.sm.mk:exon:2
Zjn_sc00009.1 maker_non_over exon 4876360 4876562 . - . ID=Zjn_sc00009.1.g11480.1.sm.mk:exon:1

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