Z. japonica Nagirizaki
Zjn_sc00009.1.g11230.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G11520.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 458 9 456 0.0 98 75.5 85.6
Subject 449 5 447
Annot | Symbols: ASP3, YLS4 | aspartate aminotransferase 3 | chr5:3685257-3687721 REVERSE LENGTH=449
NR ref|XP_004970037.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 458 17 458 0.0 100.4 89.1 91.7
Subject 460 19 460
Annot PREDICTED: aspartate aminotransferase, cytoplasmic [Setaria italica]
IRGSP Os01t0760600-03_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 458 15 458 0.0 100.4 85.8 91
Subject 460 12 460
Annot
Sbicolor Sobic.003G303300.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 458 15 458 0.0 100.2 89.5 93
Subject 459 13 459
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00009.1.g11230.1.sm.mkhc length: 458 aa.
IPR000796 Aspartate/other aminotransferase
method AccNumber shortName E-value location
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0008483 transaminase activity    
FPrintScan PR00799 TRANSAMINASE 3.1e-37 232-251
263-275
331-356
399-417
HMMPanther PTHR11879 ASPARTATE 2.4e-265 56-458
IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00105 AA_TRANSFER_CLASS_1 NA 301-314
IPR004839 Aminotransferase, class I/classII
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 3.4e-98 84-450
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 1.6e-113 101-373
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 7.5e-125 53-458
no_ID  
HMMPanther PTHR11879:SF0 SUBFAMILY 2.4e-265 56-458
Seg seg seg NA 2-19
Pseudomolecule
Chromosome Start End Strand
51519918815204591-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00009.1 maker exon 4766363 4766627 . + . ID=Zjn_sc00009.1.g11230.1.sm.mkhc:exon:1
Zjn_sc00009.1 maker exon 4766767 4766838 . + . ID=Zjn_sc00009.1.g11230.1.sm.mkhc:exon:2
Zjn_sc00009.1 maker exon 4766933 4766994 . + . ID=Zjn_sc00009.1.g11230.1.sm.mkhc:exon:3
Zjn_sc00009.1 maker exon 4767511 4767594 . + . ID=Zjn_sc00009.1.g11230.1.sm.mkhc:exon:4
Zjn_sc00009.1 maker exon 4767756 4767855 . + . ID=Zjn_sc00009.1.g11230.1.sm.mkhc:exon:5
Zjn_sc00009.1 maker exon 4767940 4768060 . + . ID=Zjn_sc00009.1.g11230.1.sm.mkhc:exon:6
Zjn_sc00009.1 maker exon 4768276 4768439 . + . ID=Zjn_sc00009.1.g11230.1.sm.mkhc:exon:7
Zjn_sc00009.1 maker exon 4768578 4768715 . + . ID=Zjn_sc00009.1.g11230.1.sm.mkhc:exon:8
Zjn_sc00009.1 maker exon 4769431 4769552 . + . ID=Zjn_sc00009.1.g11230.1.sm.mkhc:exon:9
Zjn_sc00009.1 maker exon 4769666 4769760 . + . ID=Zjn_sc00009.1.g11230.1.sm.mkhc:exon:10
Zjn_sc00009.1 maker exon 4770330 4770450 . + . ID=Zjn_sc00009.1.g11230.1.sm.mkhc:exon:11
Zjn_sc00009.1 maker exon 4770816 4771766 . + . ID=Zjn_sc00009.1.g11230.1.sm.mkhc:exon:12

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