Z. japonica Nagirizaki
Zjn_sc00009.1.g10660.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G45110.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 351 1 350 1e-88 167 54.4 71.8
Subject 586 162 563
Annot | Symbols: NPR3, ATNPR3 | NPR1-like protein 3 | chr5:18229319-18231334 FORWARD LENGTH=586
NR gb|AFW84951.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 351 1 346 e-138 176.9 75.2 83.8
Subject 621 202 598
Annot regulatory protein NPR1 [Zea mays]
IRGSP Os01t0767900-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 351 1 346 e-135 180.9 73.5 83.5
Subject 635 218 612
Annot
Sbicolor Sobic.003G308700.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 351 1 346 e-134 176.9 75.2 84
Subject 621 202 598
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00009.1.g10660.1.sm.mkhc length: 351 aa.
IPR002110 Ankyrin repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00248 ankyrin 0.011 100-128
129-159
163-192
ProfileScan PS50088 ANK_REPEAT 10.659 163-195
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 1.9e-18 105-208
HMMPfam PF12796 Ank_2 5.3e-15 106-191
ProfileScan PS50297 ANK_REP_REGION 16.520 129-201
superfamily SSF48403 Ankyrin 2.1e-17 105-218
IPR021094 NPR1/NIM1-like, C-terminal
HMMPfam PF12313 NPR1_like_C 3.7e-19 205-270
268-347
IPR024228 Domain of unknown function DUF3420
HMMPfam PF11900 DUF3420 1.2e-14 59-106
no_ID  
Seg seg seg NA 149-162
Pseudomolecule
Chromosome Start End Strand
51542462015427921+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00009.1 maker exon 4543033 4543609 . - . ID=Zjn_sc00009.1.g10660.1.sm.mkhc:exon:3
Zjn_sc00009.1 maker exon 4544779 4545529 . - . ID=Zjn_sc00009.1.g10660.1.sm.mkhc:exon:2
Zjn_sc00009.1 maker exon 4546205 4546334 . - . ID=Zjn_sc00009.1.g10660.1.sm.mkhc:exon:1

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