Z. japonica Nagirizaki
Zjn_sc00009.1.g10520.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G20340.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 677 89 503 e-105 72.4 30.9 40.9
Subject 490 12 477
Annot | Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr2:8779804-8782490 FORWARD LENGTH=490
NR ref|XP_004981646.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 677 51 503 0.0 78.1 53.9 58.3
Subject 529 1 506
Annot PREDICTED: tyrosine decarboxylase 1-like [Setaria italica]
IRGSP Os01t0770200-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 677 51 503 0.0 78.7 54.1 58.8
Subject 533 1 518
Annot
Sbicolor Sobic.003G309700.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 677 51 503 0.0 79.3 54.7 58.3
Subject 537 1 515
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00009.1.g10520.1.am.mk length: 677 aa.
IPR002129 Pyridoxal phosphate-dependent decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0016831 carboxy-lyase activity    
Biological Process GO:0019752 carboxylic acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00282 Pyridoxal_deC 3e-49 298-457
IPR010977 Aromatic-L-amino-acid decarboxylase
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0016831 carboxy-lyase activity    
FPrintScan PR00800 YHDCRBOXLASE 1.7e-31 94-113
117-134
163-182
184-202
227-247
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 2.1e-43 174-310
311-417
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 6.9e-13 418-498
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 5.3e-79 89-513
no_ID  
Gene3D G3DSA:1.20.1340.10 no description 4.9e-27 89-171
Seg seg seg NA 15-33
219-237
309-323
538-547
Pseudomolecule
Chromosome Start End Strand
51547424615478371-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00009.1 maker_non_over exon 4492583 4492680 . + . ID=Zjn_sc00009.1.g10520.1.am.mk:exon:1
Zjn_sc00009.1 maker_non_over exon 4492865 4493555 . + . ID=Zjn_sc00009.1.g10520.1.am.mk:exon:2
Zjn_sc00009.1 maker_non_over exon 4493595 4493720 . + . ID=Zjn_sc00009.1.g10520.1.am.mk:exon:3
Zjn_sc00009.1 maker_non_over exon 4493782 4494162 . + . ID=Zjn_sc00009.1.g10520.1.am.mk:exon:4
Zjn_sc00009.1 maker_non_over exon 4494187 4494347 . + . ID=Zjn_sc00009.1.g10520.1.am.mk:exon:5
Zjn_sc00009.1 maker_non_over exon 4494390 4494437 . + . ID=Zjn_sc00009.1.g10520.1.am.mk:exon:6
Zjn_sc00009.1 maker_non_over exon 4496097 4496234 . + . ID=Zjn_sc00009.1.g10520.1.am.mk:exon:7
Zjn_sc00009.1 maker_non_over exon 4496318 4496708 . + . ID=Zjn_sc00009.1.g10520.1.am.mk:exon:8

Top