Z. japonica Nagirizaki
Zjn_sc00009.1.g09310.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G15100.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 394 3 384 4e-61 93.1 34.5 54.8
Subject 367 16 346
Annot | Symbols: PIN8, ATPIN8 | Auxin efflux carrier family protein | chr5:4892159-4893937 REVERSE LENGTH=367
NR ref|NP_001130684.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 394 1 384 e-145 109.9 71.6 79.4
Subject 433 14 412
Annot uncharacterized protein LOC100191787 [Zea mays] gi|194689830|gb|ACF78999.1| unknown [Zea mays] gi|388461349|gb|AFK32347.1| putative auxin efflux carrier PIN9 [Zea mays] gi|414880099|tpg|DAA57230.1| TPA: hypothetical protein ZEAMMB73_851809 [Zea mays]
IRGSP Os01t0802700-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 394 1 384 e-141 108.1 69 78.7
Subject 426 14 405
Annot
Sbicolor Sobic.003G327500.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 394 1 384 e-142 112.7 71.3 78.4
Subject 444 14 423
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00009.1.g09310.1.sm.mk length: 394 aa.
IPR004776 Auxin efflux carrier
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF03547 Mem_trans 9e-84 1-384
no_ID  
HMMPanther PTHR31752 FAMILY 1.5e-136 1-384
HMMPanther PTHR31752:SF0 SUBFAMILY 1.5e-136 1-384
Seg seg seg NA 67-79
214-231
Pseudomolecule
Chromosome Start End Strand
51597948915981845-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00009.1 maker_non_over exon 3989109 3989938 . + . ID=Zjn_sc00009.1.g09310.1.sm.mk:exon:1
Zjn_sc00009.1 maker_non_over exon 3990018 3990103 . + . ID=Zjn_sc00009.1.g09310.1.sm.mk:exon:2
Zjn_sc00009.1 maker_non_over exon 3990203 3990360 . + . ID=Zjn_sc00009.1.g09310.1.sm.mk:exon:3
Zjn_sc00009.1 maker_non_over exon 3991158 3991234 . + . ID=Zjn_sc00009.1.g09310.1.sm.mk:exon:4
Zjn_sc00009.1 maker_non_over exon 3991432 3991465 . + . ID=Zjn_sc00009.1.g09310.1.sm.mk:exon:5

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