Z. japonica Nagirizaki
Zjn_sc00009.1.g09070.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G12200.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 453 11 390 e-156 117.2 60.7 70.2
Subject 531 12 397
Annot | Symbols: PYD2 | pyrimidine 2 | chr5:3941700-3944727 REVERSE LENGTH=531
NR dbj|BAJ88551.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 453 5 416 e-179 116.1 72.8 78.8
Subject 526 3 421
Annot predicted protein [Hordeum vulgare subsp. vulgare]
IRGSP Os01t0807900-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 453 59 416 e-175 119 67.1 72.4
Subject 539 54 435
Annot
Sbicolor Sobic.003G329400.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 453 24 396 e-179 118.3 72.4 74.8
Subject 536 27 411
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00009.1.g09070.1.sm.mkhc length: 453 aa.
IPR011059 Metal-dependent hydrolase, composite domain
method AccNumber shortName E-value location
Molecular Function GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds    
superfamily SSF51338 Composite 9.5e-23 59-426
IPR011778 Hydantoinase/dihydropyrimidinase
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006208 pyrimidine nucleobase catabolic process    
Molecular Function GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides    
HMMTigr TIGR02033 D-hydantoinase: 8.6e-133 60-369
no_ID  
Gene3D G3DSA:2.30.40.10 no description 0.00024 59-126
390-424
Gene3D G3DSA:3.20.20.140 no description 4.1e-81 127-368
HMMPanther PTHR11647 AMINOHYDROLASE 1.8e-185 47-445
HMMPanther PTHR11647:SF1 DIHYDROPYRIMIDINASE 1.8e-185 47-445
HMMPfam PF13594 Amidohydro_5 5.6e-13 78-146
Seg seg seg NA 3-24
40-55
superfamily SSF51556 Metallo-dependent 2.2e-71 112-369
Pseudomolecule
Chromosome Start End Strand
51606761316071232+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00009.1 maker exon 3899722 3900289 . - . ID=Zjn_sc00009.1.g09070.1.sm.mkhc:exon:10
Zjn_sc00009.1 maker exon 3900851 3900916 . - . ID=Zjn_sc00009.1.g09070.1.sm.mkhc:exon:9
Zjn_sc00009.1 maker exon 3901272 3901350 . - . ID=Zjn_sc00009.1.g09070.1.sm.mkhc:exon:8
Zjn_sc00009.1 maker exon 3901424 3901511 . - . ID=Zjn_sc00009.1.g09070.1.sm.mkhc:exon:7
Zjn_sc00009.1 maker exon 3901761 3901881 . - . ID=Zjn_sc00009.1.g09070.1.sm.mkhc:exon:6
Zjn_sc00009.1 maker exon 3902030 3902241 . - . ID=Zjn_sc00009.1.g09070.1.sm.mkhc:exon:5
Zjn_sc00009.1 maker exon 3902408 3902677 . - . ID=Zjn_sc00009.1.g09070.1.sm.mkhc:exon:4
Zjn_sc00009.1 maker exon 3902755 3902809 . - . ID=Zjn_sc00009.1.g09070.1.sm.mkhc:exon:3
Zjn_sc00009.1 maker exon 3903007 3903171 . - . ID=Zjn_sc00009.1.g09070.1.sm.mkhc:exon:2
Zjn_sc00009.1 maker exon 3903228 3903341 . - . ID=Zjn_sc00009.1.g09070.1.sm.mkhc:exon:1

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