Z. japonica Nagirizaki
Zjn_sc00009.1.g08760.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G03630.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 239 67 146 2e-26 169 22.2 26.8
Subject 404 88 167
Annot | Symbols: CS26 | cysteine synthase 26 | chr3:878388-880400 REVERSE LENGTH=404
NR ref|XP_004970340.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 239 1 146 9e-48 160.3 44.8 51
Subject 383 1 145
Annot PREDICTED: cysteine synthase-like isoform X1 [Setaria italica]
IRGSP Os01t0814800-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 239 1 146 7e-42 164 40.2 47.3
Subject 392 3 154
Annot
Sbicolor Sobic.003G333700.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 239 1 147 3e-44 160.7 44.8 48.5
Subject 384 1 147
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00009.1.g08760.1.sm.mk length: 239 aa.
IPR001216 Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site
method AccNumber shortName E-value location
Biological Process GO:0006535 cysteine biosynthetic process from serine    
PatternScan PS00901 CYS_SYNTHASE NA 108-126
IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
HMMPfam PF00291 PALP 6.7e-07 82-135
superfamily SSF53686 Tryptophan 2.1e-12 45-142
141-234
no_ID  
Gene3D G3DSA:3.40.50.1100 no description 3.1e-19 75-117
118-142
164-227
HMMPanther PTHR10314 SER/THR 1.9e-40 11-146
HMMPanther PTHR10314:SF8 CYSTEINE 1.9e-40 11-146
Seg seg seg NA 14-30
37-55
190-199
Pseudomolecule
Chromosome Start End Strand
51620955616211926-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00009.1 maker_non_over exon 3759028 3759279 . + . ID=Zjn_sc00009.1.g08760.1.sm.mk:exon:1
Zjn_sc00009.1 maker_non_over exon 3759567 3759676 . + . ID=Zjn_sc00009.1.g08760.1.sm.mk:exon:2
Zjn_sc00009.1 maker_non_over exon 3759755 3759812 . + . ID=Zjn_sc00009.1.g08760.1.sm.mk:exon:3
Zjn_sc00009.1 maker_non_over exon 3760545 3760613 . + . ID=Zjn_sc00009.1.g08760.1.sm.mk:exon:4
Zjn_sc00009.1 maker_non_over exon 3760861 3760920 . + . ID=Zjn_sc00009.1.g08760.1.sm.mk:exon:5
Zjn_sc00009.1 maker_non_over exon 3761050 3761130 . + . ID=Zjn_sc00009.1.g08760.1.sm.mk:exon:6
Zjn_sc00009.1 maker_non_over exon 3761309 3761398 . + . ID=Zjn_sc00009.1.g08760.1.sm.mk:exon:7

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