Z. japonica Nagirizaki
Zjn_sc00009.1.g07450.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G60010.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 640 2 565 0.0 138.4 52.3 66.7
Subject 886 215 836
Annot | Symbols: | ferric reductase-like transmembrane component family protein | chr5:24160456-24164755 FORWARD LENGTH=886
NR ref|XP_004970493.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 640 1 565 0.0 132.5 80.3 82.8
Subject 848 194 798
Annot PREDICTED: putative respiratory burst oxidase homolog protein H [Setaria italica]
IRGSP Os01t0835500-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 640 1 565 0.0 131.7 80 83.9
Subject 843 188 793
Annot
Sbicolor Sobic.003G175000.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 640 2 565 0.0 129.2 70 77.5
Subject 827 172 777
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00009.1.g07450.1.sm.mkhc length: 640 aa.
IPR000778 Cytochrome b245, heavy chain
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00466 GP91PHOX 2.9e-06 206-224
299-319
IPR013112 FAD-binding 8
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08022 FAD_binding_8 1.9e-14 390-467
IPR013121 Ferric reductase, NAD binding
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08030 NAD_binding_6 1.9e-17 474-553
IPR013130 Ferric reductase transmembrane component-like domain
HMMPfam PF01794 Ferric_reduct 1.1e-08 145-317
IPR017927 Ferredoxin reductase-type FAD-binding domain
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
ProfileScan PS51384 FAD_FR 9.485 200-470
IPR017938 Riboflavin synthase-like beta-barrel
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF63380 Riboflavin 1.1e-11 357-469
no_ID  
Gene3D G3DSA:3.40.50.80 no description 3.3e-05 473-558
HMMPanther PTHR11972 NADPH 9.8e-295 1-558
HMMPanther PTHR11972:SF5 RESPIRATORY 9.8e-295 1-558
Seg seg seg NA 205-221
304-319
476-485
superfamily SSF52343 Ferredoxin 3.1e-10 457-552
Pseudomolecule
Chromosome Start End Strand
51673705716741159+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00009.1 maker exon 3229795 3229879 . - . ID=Zjn_sc00009.1.g07450.1.sm.mkhc:exon:14
Zjn_sc00009.1 maker exon 3229931 3229944 . - . ID=Zjn_sc00009.1.g07450.1.sm.mkhc:exon:13
Zjn_sc00009.1 maker exon 3229990 3230118 . - . ID=Zjn_sc00009.1.g07450.1.sm.mkhc:exon:12
Zjn_sc00009.1 maker exon 3231025 3231060 . - . ID=Zjn_sc00009.1.g07450.1.sm.mkhc:exon:11
Zjn_sc00009.1 maker exon 3231353 3231499 . - . ID=Zjn_sc00009.1.g07450.1.sm.mkhc:exon:10
Zjn_sc00009.1 maker exon 3231576 3231726 . - . ID=Zjn_sc00009.1.g07450.1.sm.mkhc:exon:9
Zjn_sc00009.1 maker exon 3231830 3231918 . - . ID=Zjn_sc00009.1.g07450.1.sm.mkhc:exon:8
Zjn_sc00009.1 maker exon 3232040 3232142 . - . ID=Zjn_sc00009.1.g07450.1.sm.mkhc:exon:7
Zjn_sc00009.1 maker exon 3232304 3232377 . - . ID=Zjn_sc00009.1.g07450.1.sm.mkhc:exon:6
Zjn_sc00009.1 maker exon 3232455 3232550 . - . ID=Zjn_sc00009.1.g07450.1.sm.mkhc:exon:5
Zjn_sc00009.1 maker exon 3232644 3233078 . - . ID=Zjn_sc00009.1.g07450.1.sm.mkhc:exon:4
Zjn_sc00009.1 maker exon 3233135 3233557 . - . ID=Zjn_sc00009.1.g07450.1.sm.mkhc:exon:3
Zjn_sc00009.1 maker exon 3233651 3233764 . - . ID=Zjn_sc00009.1.g07450.1.sm.mkhc:exon:2
Zjn_sc00009.1 maker exon 3233871 3233897 . - . ID=Zjn_sc00009.1.g07450.1.sm.mkhc:exon:1

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