Z. japonica Nagirizaki
Zjn_sc00009.1.g06620.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G02010.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 482 1 436 e-167 113.3 59.3 71.4
Subject 546 71 471
Annot | Symbols: ATROPGEF7, ROPGEF7 | RHO guanyl-nucleotide exchange factor 7 | chr5:383493-385698 FORWARD LENGTH=546
NR ref|XP_002458766.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 482 1 477 0.0 113.1 87.6 91.3
Subject 545 74 529
Annot hypothetical protein SORBIDRAFT_03g039890 [Sorghum bicolor] gi|241930741|gb|EES03886.1| hypothetical protein SORBIDRAFT_03g039890 [Sorghum bicolor]
IRGSP Os01t0849100-00_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 482 1 477 0.0 113.3 81.3 86.9
Subject 546 75 530
Annot
Sbicolor Sobic.003G356600.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 482 1 477 0.0 113.1 87.6 91.3
Subject 545 74 529
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00009.1.g06620.1.sm.mk length: 482 aa.
IPR005512 PRONE domain
method AccNumber shortName E-value location
Molecular Function GO:0005089 Rho guanyl-nucleotide exchange factor activity    
HMMPfam PF03759 PRONE 3.1e-161 1-38
61-390
ProfileScan PS51334 PRONE 123.036 1-395
no_ID  
HMMPanther PTHR32372 FAMILY 0 1-466
HMMPanther PTHR32372:SF3 SUBFAMILY 0 1-466
Seg seg seg NA 53-60
316-329
Pseudomolecule
Chromosome Start End Strand
51709868317103375-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00009.1 maker_non_over exon 2867579 2867756 . + . ID=Zjn_sc00009.1.g06620.1.sm.mk:exon:1
Zjn_sc00009.1 maker_non_over exon 2867797 2867951 . + . ID=Zjn_sc00009.1.g06620.1.sm.mk:exon:2
Zjn_sc00009.1 maker_non_over exon 2870425 2870499 . + . ID=Zjn_sc00009.1.g06620.1.sm.mk:exon:3
Zjn_sc00009.1 maker_non_over exon 2870589 2870879 . + . ID=Zjn_sc00009.1.g06620.1.sm.mk:exon:4
Zjn_sc00009.1 maker_non_over exon 2870965 2871324 . + . ID=Zjn_sc00009.1.g06620.1.sm.mk:exon:5
Zjn_sc00009.1 maker_non_over exon 2871414 2871785 . + . ID=Zjn_sc00009.1.g06620.1.sm.mk:exon:6
Zjn_sc00009.1 maker_non_over exon 2872254 2872271 . + . ID=Zjn_sc00009.1.g06620.1.sm.mk:exon:7

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