Z. japonica Nagirizaki
Zjn_sc00009.1.g06490.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G38050.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 267 8 267 4e-66 98.1 49.4 62.9
Subject 262 2 262
Annot | Symbols: DET2, DWF6, ATDET2 | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein | chr2:15921303-15922176 REVERSE LENGTH=262
NR ref|XP_004970601.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 267 18 267 e-112 101.9 80.5 84.3
Subject 272 17 272
Annot PREDICTED: steroid 5-alpha-reductase DET2 [Setaria italica]
IRGSP Os11t0184100-01_chr11_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 267 1 267 2e-98 101.9 73.8 82.4
Subject 272 1 272
Annot
Sbicolor Sobic.003G358400.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 267 12 267 e-111 98.9 80.5 85
Subject 264 13 264
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00009.1.g06490.1.sm.mk length: 267 aa.
IPR001104 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
method AccNumber shortName E-value location
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006629 lipid metabolic process    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
HMMPfam PF02544 Steroid_dh 5.6e-44 119-267
ProfileScan PS50244 S5A_REDUCTASE 28.827 162-241
IPR016636 3-oxo-5-alpha-steroid 4-dehydrogenase
Molecular Function GO:0003865 3-oxo-5-alpha-steroid 4-dehydrogenase activity    
Biological Process GO:0008202 steroid metabolic process    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055114 oxidation-reduction process    
HMMPIR PIRSF015596 3-oxo-5-alpha-steroid 2.3e-112 7-267
no_ID  
HMMPanther PTHR10556 3-OXO-5-ALPHA-STEROID 2.3e-88 32-267
HMMPanther PTHR10556:SF2 3-OXO-5-ALPHA-STEROID 2.3e-88 32-267
Seg seg seg NA 5-11
20-34
65-96
104-126
Pseudomolecule
Chromosome Start End Strand
51716346317164266+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00009.1 maker_non_over exon 2806688 2807491 . - . ID=Zjn_sc00009.1.g06490.1.sm.mk:exon:1

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