Z. japonica Nagirizaki
Zjn_sc00009.1.g04930.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
No_hits |
| NR |
ref|XP_002456643.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
108 |
22 |
101 |
2e-34 |
319.4 |
61.1 |
70.4 |
| Subject |
345 |
236 |
315 |
|
| Annot |
hypothetical protein SORBIDRAFT_03g040000 [Sorghum bicolor] gi|241928618|gb|EES01763.1| hypothetical protein SORBIDRAFT_03g040000 [Sorghum bicolor] |
| IRGSP |
Os08t0442200-01_chr08_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
108 |
22 |
101 |
8e-29 |
324.1 |
49.1 |
59.3 |
| Subject |
350 |
240 |
319 |
|
| Annot |
|
| Sbicolor |
Sobic.003G357900.1.p|Chr03|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
108 |
22 |
101 |
1e-37 |
319.4 |
61.1 |
70.4 |
| Subject |
345 |
236 |
315 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00009.1.g04930.1.sm.mk |
length: 108 aa. |
| IPR011042 |
Six-bladed beta-propeller, TolB-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:2.120.10.30 |
no description |
1.3e-05 |
21-84 |
| no_ID |
|
| HMMPanther |
PTHR10426 |
STRICTOSIDINE |
1.1e-14 |
22-69 |
| HMMPanther |
PTHR10426:SF5 |
STRICTOSIDINE |
1.1e-14 |
22-69 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 5 | 17750799 | 17751301 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00009.1 |
maker_non_over |
exon |
2219653 |
2219972 |
. |
- |
. |
ID=Zjn_sc00009.1.g04930.1.sm.mk:exon:2 |
| Zjn_sc00009.1 |
maker_non_over |
exon |
2220149 |
2220155 |
. |
- |
. |
ID=Zjn_sc00009.1.g04930.1.sm.mk:exon:1 |