Z. japonica Nagirizaki
Zjn_sc00009.1.g04360.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G01720.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 341 58 341 3e-94 84.8 54.5 61.3
Subject 289 5 289
Annot | Symbols: ATAF1, ANAC002 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr1:268471-269514 FORWARD LENGTH=289
NR gb|ACG28360.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 341 53 341 e-138 86.5 73.3 75.4
Subject 295 3 295
Annot NAC domain-containing protein 48 [Zea mays] gi|323388641|gb|ADX60125.1| NAC transcription factor [Zea mays] gi|414879369|tpg|DAA56500.1| TPA: putative NAC domain transcription factor superfamily protein [Zea mays]
IRGSP Os01t0884300-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 341 54 341 e-132 88.9 71.8 74.2
Subject 303 3 303
Annot
Sbicolor Sobic.003G379700.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 341 53 341 e-141 85.3 73.3 75.1
Subject 291 3 291
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00009.1.g04360.1.sm.mkhc length: 341 aa.
IPR003441 NAC domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02365 NAM 2.4e-49 60-184
ProfileScan PS51005 NAC 59.693 60-210
superfamily SSF101941 NAC 1.1e-59 44-211
no_ID  
HMMPanther PTHR31719 FAMILY 1.7e-129 44-341
Seg seg seg NA 44-55
244-263
Pseudomolecule
Chromosome Start End Strand
51801701018019337-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00009.1 maker exon 1951617 1952234 . + . ID=Zjn_sc00009.1.g04360.1.sm.mkhc:exon:1
Zjn_sc00009.1 maker exon 1952359 1952633 . + . ID=Zjn_sc00009.1.g04360.1.sm.mkhc:exon:2
Zjn_sc00009.1 maker exon 1953115 1953944 . + . ID=Zjn_sc00009.1.g04360.1.sm.mkhc:exon:3

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