Z. japonica Nagirizaki
Zjn_sc00008.1.g08740.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G23820.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 557 107 547 e-140 82.6 49.4 59.1
Subject 460 1 453
Annot | Symbols: GAE6 | UDP-D-glucuronate 4-epimerase 6 | chr3:8603645-8605027 FORWARD LENGTH=460
NR ref|NP_001147328.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 557 107 531 0.0 87.4 68.2 72.2
Subject 487 1 450
Annot protein capI [Zea mays] gi|195609978|gb|ACG26819.1| protein capI [Zea mays] gi|414886189|tpg|DAA62203.1| TPA: protein capI [Zea mays]
IRGSP Os08t0526100-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 557 107 557 0.0 85.8 64.6 69.8
Subject 478 2 478
Annot
Sbicolor Sobic.002G256100.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 557 107 538 0.0 88.7 70.2 73.1
Subject 494 1 471
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00008.1.g08740.1.am.mk length: 557 aa.
IPR001509 NAD-dependent epimerase/dehydratase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0044237 cellular metabolic process    
Molecular Function GO:0050662 coenzyme binding    
HMMPfam PF01370 Epimerase 4.4e-30 231-442
IPR008089 Nucleotide sugar epimerase
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives    
FPrintScan PR01713 NUCEPIMERASE 2.9e-17 257-273
459-474
499-516
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 2.7e-43 230-417
no_ID  
Gene3D G3DSA:3.90.25.10 no description 2.6e-16 418-531
HMMPanther PTHR10366 NAD 3.4e-176 224-531
HMMPanther PTHR10366:SF42 UDP-GLUCURONATE 3.4e-176 224-531
Seg seg seg NA 97-102
128-141
150-168
181-194
200-212
533-552
superfamily SSF51735 NAD(P)-binding 1.1e-56 229-531
Pseudomolecule
Chromosome Start End Strand
191563274115634596-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00008.1 maker_non_over exon 3850718 3850977 . + . ID=Zjn_sc00008.1.g08740.1.am.mk:exon:1
Zjn_sc00008.1 maker_non_over exon 3851058 3851771 . + . ID=Zjn_sc00008.1.g08740.1.am.mk:exon:2
Zjn_sc00008.1 maker_non_over exon 3851805 3852038 . + . ID=Zjn_sc00008.1.g08740.1.am.mk:exon:3
Zjn_sc00008.1 maker_non_over exon 3852081 3852459 . + . ID=Zjn_sc00008.1.g08740.1.am.mk:exon:4
Zjn_sc00008.1 maker_non_over exon 3852487 3852573 . + . ID=Zjn_sc00008.1.g08740.1.am.mk:exon:5

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