Z. japonica Nagirizaki
Zjn_sc00008.1.g08240.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G21630.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 372 40 255 8e-32 165.9 22.6 33.9
Subject 617 4 213
Annot | Symbols: CERK1, LYSM RLK1 | chitin elicitor receptor kinase 1 | chr3:7615543-7618530 REVERSE LENGTH=617
NR gb|EAZ45334.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 372 44 347 2e-88 159.4 52.4 62.9
Subject 593 4 368
Annot hypothetical protein OsJ_29979 [Oryza sativa Japonica Group]
IRGSP Os09t0511000-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 372 62 255 1e-71 62.9 36.6 43.5
Subject 234 17 218
Annot
Sbicolor Sobic.002G260900.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 372 61 306 5e-98 155.4 48.9 55.9
Subject 578 18 313
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00008.1.g08240.1.sm.mkhc length: 372 aa.
IPR011009 Protein kinase-like domain
method AccNumber shortName E-value location
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 0.011 273-305
315-365
no_ID  
Gene3D G3DSA:3.30.200.20 no description 3.8e-06 268-305
HMMPanther PTHR24420 FAMILY 7.1e-20 303-369
HMMPanther PTHR24420:SF272RECEPTOR LECTIN 7.1e-20 303-369
Seg seg seg NA 10-15
43-59
125-138
Pseudomolecule
Chromosome Start End Strand
191582599215830613+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00008.1 maker exon 3654701 3654976 . - . ID=Zjn_sc00008.1.g08240.1.sm.mkhc:exon:4
Zjn_sc00008.1 maker exon 3655071 3655169 . - . ID=Zjn_sc00008.1.g08240.1.sm.mkhc:exon:3
Zjn_sc00008.1 maker exon 3657014 3657165 . - . ID=Zjn_sc00008.1.g08240.1.sm.mkhc:exon:2
Zjn_sc00008.1 maker exon 3658557 3659322 . - . ID=Zjn_sc00008.1.g08240.1.sm.mkhc:exon:1

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