Z. japonica Nagirizaki
Zjn_sc00008.1.g06980.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G10970.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 399 16 399 e-108 102.3 54.6 67.7
Subject 408 33 408
Annot | Symbols: ZIP4, ATZIP4 | zinc transporter 4 precursor | chr1:3665201-3666933 REVERSE LENGTH=408
NR gb|AGT17193.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 399 1 399 e-139 108 71.9 81
Subject 431 1 431
Annot zinc transporter [Saccharum hybrid cultivar R570]
IRGSP Os06t0566300-00_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 399 18 388 e-108 97.5 62.2 70.9
Subject 389 1 378
Annot
Sbicolor Sobic.010G171300.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 399 1 399 e-139 110.8 70.9 79.9
Subject 442 8 442
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00008.1.g06980.1.sm.mkhc length: 399 aa.
IPR003689 Zinc/iron permease
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Biological Process GO:0030001 metal ion transport    
Molecular Function GO:0046873 metal ion transmembrane transporter activity    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF02535 Zip 1.8e-61 44-396
IPR004698 Zinc/iron permease, fungal/plant
Molecular Function GO:0005385 zinc ion transmembrane transporter activity    
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0071577 zinc ion transmembrane transport    
HMMTigr TIGR00820 zip: 8.5e-122 30-399
no_ID  
HMMPanther PTHR11040 ZINC/IRON 7.5e-159 23-399
HMMPanther PTHR11040:SF1 ZINC/IRON 7.5e-159 23-399
Seg seg seg NA 29-42
301-314
Pseudomolecule
Chromosome Start End Strand
191647232616474594+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00008.1 maker exon 3010720 3011579 . - . ID=Zjn_sc00008.1.g06980.1.sm.mkhc:exon:4
Zjn_sc00008.1 maker exon 3011693 3011842 . - . ID=Zjn_sc00008.1.g06980.1.sm.mkhc:exon:3
Zjn_sc00008.1 maker exon 3012157 3012842 . - . ID=Zjn_sc00008.1.g06980.1.sm.mkhc:exon:2
Zjn_sc00008.1 maker exon 3012931 3012988 . - . ID=Zjn_sc00008.1.g06980.1.sm.mkhc:exon:1

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