Z. japonica Nagirizaki
Zjn_sc00008.1.g05160.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G32380.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 241 157 237 3e-27 166 27 31.1
Subject 400 186 290
Annot | Symbols: PRS2 | phosphoribosyl pyrophosphate (PRPP) synthase 2 | chr1:11682033-11684229 FORWARD LENGTH=400
NR ref|XP_004965879.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 241 157 237 4e-32 166 32.4 33.6
Subject 400 187 290
Annot PREDICTED: ribose-phosphate pyrophosphokinase 2, chloroplastic-like [Setaria italica]
IRGSP Os06t0617800-04_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 241 157 237 3e-34 117.8 32 33.2
Subject 284 71 174
Annot
Sbicolor Sobic.010G193600.2.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 241 157 237 6e-32 145.2 30.7 32.4
Subject 350 186 289
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00008.1.g05160.1.sm.mkhc length: 241 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.40.50.2020 no description 1.8e-09 183-237
HMMPanther PTHR10210 RIBOSE-PHOSPHATE 4.4e-18 159-239
Seg seg seg NA 73-99
116-143
199-209
superfamily SSF53271 PRTase-like 4.1e-12 163-237
Pseudomolecule
Chromosome Start End Strand
191728905217293993-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00008.1 maker exon 2191321 2191392 . + . ID=Zjn_sc00008.1.g05160.1.sm.mkhc:exon:1
Zjn_sc00008.1 maker exon 2192222 2192431 . + . ID=Zjn_sc00008.1.g05160.1.sm.mkhc:exon:2
Zjn_sc00008.1 maker exon 2192541 2192729 . + . ID=Zjn_sc00008.1.g05160.1.sm.mkhc:exon:3
Zjn_sc00008.1 maker exon 2193624 2193698 . + . ID=Zjn_sc00008.1.g05160.1.sm.mkhc:exon:4
Zjn_sc00008.1 maker exon 2193898 2194062 . + . ID=Zjn_sc00008.1.g05160.1.sm.mkhc:exon:5
Zjn_sc00008.1 maker exon 2195713 2196262 . + . ID=Zjn_sc00008.1.g05160.1.sm.mkhc:exon:6

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