Z. japonica Nagirizaki
Zjn_sc00008.1.g04870.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G12110.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 282 1 264 8e-89 105.7 53.9 68.4
Subject 298 1 293
Annot | Symbols: SMO1-1, ATSMO1, ATSMO1-1 | sterol-4alpha-methyl oxidase 1-1 | chr4:7254197-7256004 FORWARD LENGTH=298
NR ref|NP_001136959.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 282 1 278 6e-96 108.5 62.4 71.3
Subject 306 1 302
Annot hypothetical protein [Zea mays] gi|194697766|gb|ACF82967.1| unknown [Zea mays] gi|414877737|tpg|DAA54868.1| TPA: hypothetical protein ZEAMMB73_684331 [Zea mays]
IRGSP Os10t0545200-02_chr10_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 282 1 269 2e-88 106.7 59.9 69.5
Subject 301 1 296
Annot
Sbicolor Sobic.001G309200.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 282 1 273 4e-96 106.7 61 72.3
Subject 301 1 299
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00008.1.g04870.1.sm.mk length: 282 aa.
IPR006694 Fatty acid hydroxylase
method AccNumber shortName E-value location
Molecular Function GO:0005506 iron ion binding    
Biological Process GO:0006633 fatty acid biosynthetic process    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF04116 FA_hydroxylase 3.6e-15 105-216
105-216
no_ID  
Coil coil coiled-coil NA 242-263
242-263
HMMPanther PTHR11863 STEROL 2.2e-131 1-269
1-269
HMMPanther PTHR11863:SF18 SUBFAMILY 2.2e-131 1-269
1-269
Seg seg seg NA 45-65
251-263
264-274
45-65
251-263
264-274
Pseudomolecule
Chromosome Start End Strand
191741706317419052+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00008.1 maker_non_over exon 2066262 2066317 . - . ID=Zjn_sc00008.1.g04870.1.sm.mk:exon:6
Zjn_sc00008.1 maker_non_over exon 2066650 2066689 . - . ID=Zjn_sc00008.1.g04870.1.sm.mk:exon:5
Zjn_sc00008.1 maker_non_over exon 2066850 2066882 . - . ID=Zjn_sc00008.1.g04870.1.sm.mk:exon:4
Zjn_sc00008.1 maker_non_over exon 2067049 2067196 . - . ID=Zjn_sc00008.1.g04870.1.sm.mk:exon:3
Zjn_sc00008.1 maker_non_over exon 2067325 2067566 . - . ID=Zjn_sc00008.1.g04870.1.sm.mk:exon:2
Zjn_sc00008.1 maker_non_over exon 2067922 2068251 . - . ID=Zjn_sc00008.1.g04870.1.sm.mk:exon:1

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