Zoysia Genome Database

Z. japonica Nagirizaki

Zjn_sc00008.1.g04400.1.sm.mk

Sequence

Transcript sequence

Predicted nucleotide sequence (cds)
Predicted translated sequence (pep)

Genome sequence (Zjn_sc00008.1)

	Init: Term: reverse complement

BLAST

TAIR10	AT1G13110.1		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	509	17	502	2e-98	99	36.1	55.6
		Subject	504	18	502
		Annot	\| Symbols: CYP71B7 \| cytochrome P450, family 71 subfamily B, polypeptide 7 \| chr1:4467272-4468857 FORWARD LENGTH=504
NR	ref\|XP_002437333.1\|		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	509	1	507	0.0	102.2	78.8	88
		Subject	520	1	517
		Annot	hypothetical protein SORBIDRAFT_10g025100 [Sorghum bicolor] gi\|241915556\|gb\|EER88700.1\| hypothetical protein SORBIDRAFT_10g025100 [Sorghum bicolor]
IRGSP	Os06t0641500-00_chr06_irgsp1_locus		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	509	4	509	0.0	102.6	69.7	80.6
		Subject	522	26	522
		Annot
Sbicolor	Sobic.010G203500.1.p\|Chr10\|gene		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	509	1	507	0.0	102.2	78.8	88
		Subject	520	1	517
		Annot

InterProScan

A list of protein families, domains and functional sites (searches in InterPro)

IPR001128	Cytochrome P450
Zjn_sc00008.1.g04400.1.sm.mk				length: 509 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0005506	iron ion binding
Molecular Function	GO:0009055	electron carrier activity
Molecular Function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Molecular Function	GO:0020037	heme binding
Biological Process	GO:0055114	oxidation-reduction process
FPrintScan	PR00385	P450	4.9e-10	305-322 358-369 437-446 305-322 358-369 437-446
Gene3D	G3DSA:1.10.630.10	no description	1.7e-129	31-501 31-501
HMMPfam	PF00067	p450	1.1e-94	37-481 37-481
superfamily	SSF48264	Cytochrome	2.8e-127	34-502 34-502
IPR002401	Cytochrome P450, E-class, group I
Molecular Function	GO:0005506	iron ion binding
Molecular Function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Molecular Function	GO:0020037	heme binding
Biological Process	GO:0055114	oxidation-reduction process
FPrintScan	PR00463	EP450I	6.3e-32	65-84 89-110 294-311 314-340 357-375 436-446 446-469 65-84 89-110 294-311 314-340 357-375 436-446 446-469
IPR017972	Cytochrome P450, conserved site
Molecular Function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Biological Process	GO:0055114	oxidation-reduction process
PatternScan	PS00086	CYTOCHROME_P450	NA	439-448 439-448
no_ID
HMMPanther	PTHR25943	FAMILY	4.8e-113	293-488 293-488
HMMPanther	PTHR25943:SF61	SUBFAMILY	4.8e-113	293-488 293-488
Seg	seg	seg	NA	9-20 33-44 272-283 496-509 9-20 33-44 272-283 496-509

Pseudomolecule

Chromosome	Start	End	Strand
19	17582186	17584412	+

Coding region

scaffold	source	type	start	end	score	strand	phase	attributes
Zjn_sc00008.1	maker_non_over	exon	1900902	1901531	.	-	.	ID=Zjn_sc00008.1.g04400.1.sm.mk:exon:2
Zjn_sc00008.1	maker_non_over	exon	1902229	1903128	.	-	.	ID=Zjn_sc00008.1.g04400.1.sm.mk:exon:1