Z. japonica Nagirizaki
Zjn_sc00008.1.g04280.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G20280.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 627 1 519 0.0 166.3 57.6 67.6
Subject 1043 1 629
Annot | Symbols: ATSPS1F, SPS1F | sucrose phosphate synthase 1F | chr5:6844994-6849997 REVERSE LENGTH=1043
NR ref|XP_008648202.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 627 1 519 0.0 155.5 76.4 79.4
Subject 975 1 627
Annot PREDICTED: uncharacterized protein LOC100384650 isoform X1 [Zea mays]
IRGSP Os02t0184400-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 627 1 519 0.0 161.2 71.8 75.9
Subject 1011 49 664
Annot
Sbicolor Sobic.010G205100.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 627 1 519 0.0 156.3 75.6 78.6
Subject 980 1 633
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00008.1.g04280.1.sm.mkhc length: 627 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR12526 GLYCOSYLTRANSFERASE 9e-243 41-519
HMMPanther PTHR12526:SF28 SUCROSE 9e-243 41-519
HMMPfam PF13579 Glyco_trans_4_4 1e-07 193-392
Seg seg seg NA 18-37
102-110
317-328
superfamily SSF53756 UDP-Glycosyltransferase/glycogen 1.1e-27 185-523
Pseudomolecule
Chromosome Start End Strand
191762914517636644-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00008.1 maker exon 1848670 1848894 . + . ID=Zjn_sc00008.1.g04280.1.sm.mkhc:exon:1
Zjn_sc00008.1 maker exon 1849013 1849102 . + . ID=Zjn_sc00008.1.g04280.1.sm.mkhc:exon:2
Zjn_sc00008.1 maker exon 1851322 1851527 . + . ID=Zjn_sc00008.1.g04280.1.sm.mkhc:exon:3
Zjn_sc00008.1 maker exon 1851922 1851985 . + . ID=Zjn_sc00008.1.g04280.1.sm.mkhc:exon:4
Zjn_sc00008.1 maker exon 1852178 1852876 . + . ID=Zjn_sc00008.1.g04280.1.sm.mkhc:exon:5
Zjn_sc00008.1 maker exon 1853273 1853404 . + . ID=Zjn_sc00008.1.g04280.1.sm.mkhc:exon:6
Zjn_sc00008.1 maker exon 1853477 1853500 . + . ID=Zjn_sc00008.1.g04280.1.sm.mkhc:exon:7
Zjn_sc00008.1 maker exon 1853874 1853927 . + . ID=Zjn_sc00008.1.g04280.1.sm.mkhc:exon:8
Zjn_sc00008.1 maker exon 1854144 1854204 . + . ID=Zjn_sc00008.1.g04280.1.sm.mkhc:exon:9
Zjn_sc00008.1 maker exon 1854981 1855032 . + . ID=Zjn_sc00008.1.g04280.1.sm.mkhc:exon:10
Zjn_sc00008.1 maker exon 1855236 1856169 . + . ID=Zjn_sc00008.1.g04280.1.sm.mkhc:exon:11

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